Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2855 ATGAAGCGAGCAAGGAAATCGTCGAACAGGGTTTCGTGGGCGACGGGAGGTAATCTGTGTCAGGTAAAATTGTTCGTATCTGAGGACTGCCCTTCAAAAGTTGGTCAGAAATCTCAAGATCATCTTCAAGCAAAGACATCATCAATGTTGCATTCAAATACTACTGAATATAATGATTTACCCCCGGGGTTTGAATGCAATCAATTTCTGAACCAATCAACGGATGAACTCTACTGGATTTCTCAGATTCATTGGAGATGCCCTCCTCCGTTTGTTTTCAGTCATAATTGGCACGTTGCAGCTGGTGAAGAAAGTAGGGAGAATGAAGATCAAAAGCTTAGAGAACTGAGAGTGCTTGAAGCAGTTTATCCTCGTCTTTCTGCCATTCCACCTAGGCCTTCTGTATCTTTGGATGTAGAAGAGGAAGATTTTGATGATAACCTCACCCCTCTCGTCCCTATCATTCCCATCGAGGAAGAAGAATCTATGGATGATCAACCTGTATCAGCAGCAGCAGTAATGGACGCTCTTGCCACCGTGCAGTCGCAAAACTTGTACCTACACACATTAGCAAGCACAACTCCCGTTCAGTGTAATACCTCTTCAGTTGCCTCCCATGCCTGTGGAAATCCCTTACCTGGGATATCTCCTGGTTCGGAAGTAGACTTGGCTGCAGCCTCTGCTGCTGTAGCTGCCGTTATGAAGAGTAAGGAGCTAGGAAGCTTGATTGATATGGATCTACTTGTTAGAATATTTAATGACCCAGTTATGATTGAGAAATTAGTTAATGATGATACAAGTGTTGACACAACTGTAACTGCATCCTCAAATAGTACTGTGAGTATATCGACGTCTGGATTGAAGCCTGCAACTCCGTCAGTTCCACTGTCAACAGCTACAAGTACACTGGGTTTGTTATCTGCTTCTGGGATGAAGCCAGCAACTCCATCAGTCTCATTGTTGACACTGGTACCTGAGAAGCCGGCCACTCCGTCAGTTCCAATGTCTAGGCCTATGCCCGGTAAGCCAGCAACTCCCTCAGTTCTGTTGCCTATTCCTGGTAAGCCAGCAACTCCCTCAGTTCCGTTGCATACTCCTGCACTTGAAATGCACAGGCCTGTTAACAAAAACATTCACCATATGTCAAATGGAGTTCTACCATCTGTAGATACCCAGCCTCCTCAACAAGATACTATTCTCGCATCTGGGGCAAAGCATGCAGCATCATTGACTTCCATTCCTATGACTTCTTCTGGTGGGAATATGCATCCAGTGAAAAATCTGGTGCGATCCGCTGCTAATACAATGCCTTACCAAGCAAGTACAGCTTCAGCATTTGCTGTGAAGGAAGCTCATCCTGTTAAGGATGCCAACTATTTAAAGAACCTAATTAGGCAACATGGTTCAGATGAGCAAGACACGCAGGACTCACAATTAGGTGTCCGGCATAGTAACTTCAAAGATTTGAAATTGGCACATAACAATAAACCAGGAGAAGTAAAATTCAAAATCCAGAAAACTTGCATATTCTTTAACAGTTCAAGGGGGTGTCGAAATGGTTCCAGTTGCCCCTATCTGCATGACATGTCAGTTCAGTGTGGAGCTGGTACTGTTCTTGGGGCCCAGAATGCGAAAAGATTGAAACTGGGACATGAAATTAATGGAAGAATGTAG 1674 0.4432 MKRARKSSNRVSWATGGNLCQVKLFVSEDCPSKVGQKSQDHLQAKTSSMLHSNTTEYNDLPPGFECNQFLNQSTDELYWISQIHWRCPPPFVFSHNWHVAAGEESRENEDQKLRELRVLEAVYPRLSAIPPRPSVSLDVEEEDFDDNLTPLVPIIPIEEEESMDDQPVSAAAVMDALATVQSQNLYLHTLASTTPVQCNTSSVASHACGNPLPGISPGSEVDLAAASAAVAAVMKSKELGSLIDMDLLVRIFNDPVMIEKLVNDDTSVDTTVTASSNSTVSISTSGLKPATPSVPLSTATSTLGLLSASGMKPATPSVSLLTLVPEKPATPSVPMSRPMPGKPATPSVLLPIPGKPATPSVPLHTPALEMHRPVNKNIHHMSNGVLPSVDTQPPQQDTILASGAKHAASLTSIPMTSSGGNMHPVKNLVRSAANTMPYQASTASAFAVKEAHPVKDANYLKNLIRQHGSDEQDTQDSQLGVRHSNFKDLKLAHNNKPGEVKFKIQKTCIFFNSSRGCRNGSSCPYLHDMSVQCGAGTVLGAQNAKRLKLGHEINGRM 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2855 557 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 2 550 - -
Bisa01g2855 557 ProSiteProfiles Zinc finger C3H1-type profile. 502 530 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2855 Bisa-ChrBisa01 57527611 57532841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2855 82 172 Homeobox Transcription Factor Family AT4G02560 38.144 2.36e-07 52.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bisa01g2855 None None None