Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2836 ATGAGCTCCGACACGTCCACCGGCGGTGGTTCTTCCGGCAGCTCGGCGTCGGCGTCGGGCAGGGACAAGAAGAAGGAGAAGGCCAGAGTGAGCCGCACTTCGATGATACTTTGGCTTTCGCATCAAAACGACGCCGCCGCTGTTCGGAAACTCCTGGAGGAGGATCCGTCACTTGTGAAGGCAAGAGACTACGATCACCGCACTCCGCTTCATGTTGCTTCGCTCCATGGCTGGGTTGACGTGGCTAATTACTTGCTTGAGTTTGGCGCCGACGTCAACGCTCAGGATCGTTGGAAAAACACTCCTCTAGCTGATGCAGAAGGGGCTAAGAAGTATAGCATGATGGAGCTTTTAAAATCGTACGGAGGGTTGTCTTATGGACAAAGTGGAAGCCACTCTGAACATAAGACCGTTGCACCTCCGTTGCCTAACAAATGTGATTGGGAAATCGACCCTACTGAGCTGGACTTCTCACATTCAGATCGAATTGGAAAGGGATCTTTTGGTGAGATTTTAAGAGCCCATTGGCGTGGGACACCGGTTGCTGTCAAACGCATTCTTCCATCTCTTTCAGAAGATAAATTGGTGACCCAGGACTTCAGGCATGAGGTTAATTTGCTAGTGAGGCTTCGACACCCAAATATAGTCCAGTTTCTTGGAGCTGTTACTGAGAGGAAGCCCCTTATGTTAATTACTGAATATCTAAGAGGGGGTGATCTTCATCAGTACCTTAAGGATAAAAGTTCAATTAGTACTTCATCAGCTGTTGACTTCGCGATGGATATTGCCAGAGGGATGGCCTATCTTCACAATGAGCCTAATGTTATAATTCATCGAGACCTAAAGCCAAGAAATGTGCTTTTAGTGAACTCTAGTGCCGAGCATTTAAAAGTCGGAGATTTTGGACTGAGCAAGCTTATCAAGGTCCAGAATTCTCATGATGTTTACAAGATGACTGGTGAAACTGGAAGCTACCGCTATATGGCTCCTGAAGTATTCAAACACCGGAAATACGACAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTCTGTACGAGATGCTTGAAGGAGAACCACCTTTTGCAAATTATGAACCTTATGATGGAGCGAAATATGTGGCAGAAGGACACAGACCAACTATGCACGCAAAGGGTTACATCCCTGAACTGCGAGAGTTAACAGAGCAGTGTTGGTTAGCTGATTATAGTCAAAGACCTTCCTTCTTGGAGATCCTCAAACGGCTTGAGAAGATCAAAGAACAAAATCTATCTTTAGATCACTCCTGGAAATTGTTCTCTTGA 1302 0.4616 MSSDTSTGGGSSGSSASASGRDKKKEKARVSRTSMILWLSHQNDAAAVRKLLEEDPSLVKARDYDHRTPLHVASLHGWVDVANYLLEFGADVNAQDRWKNTPLADAEGAKKYSMMELLKSYGGLSYGQSGSHSEHKTVAPPLPNKCDWEIDPTELDFSHSDRIGKGSFGEILRAHWRGTPVAVKRILPSLSEDKLVTQDFRHEVNLLVRLRHPNIVQFLGAVTERKPLMLITEYLRGGDLHQYLKDKSSISTSSAVDFAMDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSSAEHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFANYEPYDGAKYVAEGHRPTMHAKGYIPELRELTEQCWLADYSQRPSFLEILKRLEKIKEQNLSLDHSWKLFS 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2836 433 ProSitePatterns Protein kinases ATP-binding region signature. 163 184 IPR017441 GO:0005524
Bisa01g2836 433 FunFam serine/threonine-protein kinase STY46-like 150 236 - -
Bisa01g2836 433 Pfam Ankyrin repeats (many copies) 66 103 IPR002110 GO:0005515
Bisa01g2836 433 PRINTS Tyrosine kinase catalytic domain signature 270 288 IPR001245 GO:0004672|GO:0006468
Bisa01g2836 433 PRINTS Tyrosine kinase catalytic domain signature 386 408 IPR001245 GO:0004672|GO:0006468
Bisa01g2836 433 PRINTS Tyrosine kinase catalytic domain signature 232 245 IPR001245 GO:0004672|GO:0006468
Bisa01g2836 433 SMART serkin_6 157 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2836 433 Gene3D Phosphorylase Kinase; domain 1 149 236 - -
Bisa01g2836 433 ProSiteProfiles Ankyrin repeat region circular profile. 65 97 - -
Bisa01g2836 433 MobiDBLite consensus disorder prediction 1 18 - -
Bisa01g2836 433 FunFam Integrin-linked protein kinase family 236 432 - -
Bisa01g2836 433 MobiDBLite consensus disorder prediction 1 28 - -
Bisa01g2836 433 SMART ANK_2a 65 94 IPR002110 GO:0005515
Bisa01g2836 433 ProSiteProfiles Ankyrin repeat profile. 65 97 IPR002110 GO:0005515
Bisa01g2836 433 ProSiteProfiles Protein kinase domain profile. 157 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2836 433 PIRSF ILK 1 433 - -
Bisa01g2836 433 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 53 420 - -
Bisa01g2836 433 Gene3D Transferase(Phosphotransferase) domain 1 237 430 - -
Bisa01g2836 433 CDD STKc_MAP3K-like 163 415 - -
Bisa01g2836 433 SUPERFAMILY Ankyrin repeat 34 122 IPR036770 -
Bisa01g2836 433 SUPERFAMILY Protein kinase-like (PK-like) 149 421 IPR011009 -
Bisa01g2836 433 Gene3D - 8 130 IPR036770 -
Bisa01g2836 433 Pfam Protein tyrosine and serine/threonine kinase 160 415 IPR001245 GO:0004672|GO:0006468
Bisa01g2836 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2836 Bisa-ChrBisa01 57140331 57147516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2836 1 433 MAP Kinase Kinase Kinase AT1G14000 78.311 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bisa01g2836 PK_Tyr_Ser-Thr 1.2e-64 CL0016