Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2827 ATGGGTGGAATTGATGACCAACCGCCGTCGTCGGCGCCGCGACCCCCCATCGCTCTTCCGCCACGGACTTCCATGGACGCGCTTTTCAATGGTGGGCCCTCTGGCGGCGGCTTTGGGTTCAGCCCCGGTCCCATGAGTCTGGTTTCGAGCTTCTTCAACGAGAACGAAGACTTCAAGTCCTTCTCGCAGCTTCTGGCGGGCGCTATGTCCTCACCGGTGCCGGCGGAGCAGAAGGACTCCGGTGGAGTTAGCGGCGTGGGTTTTAAGCCGACGTTCACGGTTCCGGCTGGGTTGAGCCCTGCTGGTTTGCTCGATTCGCCAGGGCTCCTTTCAGCTTCTCAGGGAGGCTTTGGAATGTCACACCAGCAGGCCTTAGCACAGGTCACAGCTCAAGCTGTGCAGGCCAACTCCAATATGCATATCGAAGATGGAAATCCATCTTCTGTATTGGCAGCGCCTGCAGGCACTTCCAATACTACACGACATCAGATGCCACCACAAACAATGCCAGATTCTGGTGCAACAATGAAGGAATGCCCTGACGATGGCTTCAACTGGCGCAAGTATGGGCAGAAACAGGTGAAAGGCAGCGAGTTCCCTCGAAGTTATTACAAGTGCACACATCCAGACTGCCCCGTCAAGAAAAAGGTGGAGCGGTCACTCGATGATGACCATGTTGTTGCAATCATTTACAAAGGGCAGCACAACCATCAAGCTCCTCGCCCCAGCAAGCGCGCAAAAGACACAGCAGCAACTTCAAATGAAAATTCAAGCATGCAAGGGAATCTTGATTTCAAAGAAGGGATAGCTTGTGAGTCAACAGCTGAACATGTATCAGAAGGATCAAGTGACAGTGAAGAAGCAGGTGATCGTGAAACTGAAGTGGAAAAGAAAATTGATGAACCTGACCCCAAGAGGAGAAATACAGAAGCCAGGGTATCGGATGCAGCCTCTTCACATAGGGCTGCCATGGAGCCTAGAATCATTGTGCAGACAACAAGTGAAGTTGATCTGTTAGACGATGGCTATAGATGGCGCAAATACGGGCAGAAAGTTGTCAAAGGCAACCCTTACCCAAGGAGCTACTACAAGTGCACAACTGTAGGTTGCAATGTCCGGAAGCATGTTGAGAGGGCCTCCACGGATCCTAAAGCTGTCATAACAACGTACGAAGGGAAACACAACCACGAGGTTCCAGCAGCTAAAACTAACAGCCACACTATTGCAAACAACACTGCATCCAACCTAAAATCTCACAATTCCATAATACCACAGAATCATAGTTTCAGCAGCAGAGGTATAGGGGGCAATAAGCAACAGCCGGTGGCACGTCTTAGGCTGAAGGAAGAGCAGATAACCTAG 1362 0.5125 MGGIDDQPPSSAPRPPIALPPRTSMDALFNGGPSGGGFGFSPGPMSLVSSFFNENEDFKSFSQLLAGAMSSPVPAEQKDSGGVSGVGFKPTFTVPAGLSPAGLLDSPGLLSASQGGFGMSHQQALAQVTAQAVQANSNMHIEDGNPSSVLAAPAGTSNTTRHQMPPQTMPDSGATMKECPDDGFNWRKYGQKQVKGSEFPRSYYKCTHPDCPVKKKVERSLDDDHVVAIIYKGQHNHQAPRPSKRAKDTAATSNENSSMQGNLDFKEGIACESTAEHVSEGSSDSEEAGDRETEVEKKIDEPDPKRRNTEARVSDAASSHRAAMEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTVGCNVRKHVERASTDPKAVITTYEGKHNHEVPAAKTNSHTIANNTASNLKSHNSIIPQNHSFSSRGIGGNKQQPVARLRLKEEQIT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2827 453 MobiDBLite consensus disorder prediction 427 453 - -
Bisa01g2827 453 MobiDBLite consensus disorder prediction 140 170 - -
Bisa01g2827 453 SMART WRKY_cls 180 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 SMART WRKY_cls 339 398 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 SUPERFAMILY WRKY DNA-binding domain 331 399 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 FunFam WRKY transcription factor 167 241 - -
Bisa01g2827 453 MobiDBLite consensus disorder prediction 140 180 - -
Bisa01g2827 453 Pfam WRKY DNA -binding domain 181 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 Pfam WRKY DNA -binding domain 340 397 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 MobiDBLite consensus disorder prediction 279 314 - -
Bisa01g2827 453 MobiDBLite consensus disorder prediction 1 36 - -
Bisa01g2827 453 SUPERFAMILY WRKY DNA-binding domain 179 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 ProSiteProfiles WRKY domain profile. 175 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 FunFam WRKY transcription factor 33 326 392 - -
Bisa01g2827 453 MobiDBLite consensus disorder prediction 232 320 - -
Bisa01g2827 453 MobiDBLite consensus disorder prediction 247 263 - -
Bisa01g2827 453 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 107 424 IPR044810 GO:0003700
Bisa01g2827 453 Gene3D WRKY domain 172 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 Gene3D WRKY domain 324 400 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2827 453 ProSiteProfiles WRKY domain profile. 334 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2827 Bisa-ChrBisa01 56879747 56883142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2827 14 453 WRKY Transcription Factor Family AT2G03340 51.644 2.39e-146 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa01g2827 WRKY 2.4e-26 CL0274