Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2801 ATGGAAGACAAAGACAGGGCATTCTATGATCCTTCTTTCTGGACAACAGGAGCTCATGACACCGACGATACCTACAATACCAAACTCAGCGAGCTCGGCTGGAATTTTTACCCGGACCTACCAAACCCGGTCAGGTCGCTGTCGCTCCCTCCAGCTGGTCCGGTTGAACCGGCCGACGCCTCCAAGTCGAAGTCTTATAATCAATCGGTCTCGCTGTACTCCAGCGAGGATCCACCGGAGAATTCCACCGCCTCCGACGCGAGACCACCCGAGACACCGAGTGGAAGTAAGAAGAAGGGGGAAAAGCAACTACAGCAGCCGCGGTTTGCATTCATGACCAAGACCCAAATTGATAACCTTGAAGATGGCTACAGATGGCGCAAGTATGGTCAGAAGGCTGTCAAAAATAGTCCATTCCCTAGGAGCTACTATCGTTGCACAAACAACAAATGCACAGTGAAGAAAAGGGTGGAAAGATCGTGGGAGGACCCAAGCATTGTTATCACCACATACGAAGGACAACACAGTCACCATTCTACGGTTGGATTTCCTCGAAATGGAATCATCAATCATGGAGCTCCTTCACAAATGTCTCATCCTCAGTTCTATTATCCTTTACATTTACCCATTCAAAATGCTCCCACTTTTGGTCAGCCTCTCCAATATCAGACACACGACGAAGCTTTAGGATCCAGTTCTGTGATGCCCCATCAAGGAGCACTACTTGCAGATATTATGCCCTCAGTGACGAAGATCACTTGGAGGGAGATAGATTTAATAATGGAGAAAGTGGCGAAGAACAAGCACGTGATATTCAAGGACTATGTTATAGGGTATCCCAAGGAATCAGACATGTACATAAGTAGCAGTACAATTGAATTGAAGGTTCCTCGAGGATCAAATGCAGTTTTGGTGAAGAATCTCTACCTTTCTTGTGATCCTACCATGCAATTCCGAATGAGGAATGTTGTGCAAGGCCCTTCCAAATCTGAATGCTACGTCCCTGGCTCTCCCATAAATGGGTTTGGAGTTGCTAAAGTTGTGGATTCAGAGCATCCAAACTTGAGGAAGGGTGACTTAGTTTGGGGAACAACAAAATGGGAAGAATACAGTGTCATTCAGAATCCAGAAAGCCTCTTTAAAATCCAACAAACTGATGTGCCCCTCTCCTATTACACTGGAATTCTTGGGATGCCTGGTATTAGTGCGTATGCTGGACTGTATGAAATTAATCCTCCAAGGAAAGGATGGCATGTGTTCATCTCAGCAGCATCTGGTGCTGTTGGTCAGCTTGTTGGACAATATGCAAAATTACTGGGTTGCTATGTCGTTGGCACTGCTGGTTCTCAACAAAAAGTTGATTTGCTCAAACATAAGCTTGGGTTTGATGAAGCTTTCAATTACAAGGAAGAGCCTGACTTGGATGCTGCCATTAAAAGGTACTTTCCTCAAGGCATAGATCTCTACTTTGAGCAAGTTGGGGGCAAAATGCTTGATGCAGTGCTGATGAACATGAAGGAACATGGGTGTATCACTGTGTGTGGAATGATTTCACAGTACAATATTGCAGAGCCTGAGGCCCTAAAGAATTTGATGCAAATTGTTTCTAAAAGGCTTACTATAAAAGGGTTCACACACAGAGATCACCATCATCTCTATCCAAAGCTCCTGGAGACTGTGCTTCCATACATTAGAGAGAAGAAAGTTGTATATATTGAAGACACTGTTGAAGGGCTTGAGAATGGCCCTGCAGCTCTGGTTGGTCTCTTCAGTGGCAGAAACTTTGGAAAACAAGTAGTTGCAGTTGCTCATGAATGA 1818 0.4505 MEDKDRAFYDPSFWTTGAHDTDDTYNTKLSELGWNFYPDLPNPVRSLSLPPAGPVEPADASKSKSYNQSVSLYSSEDPPENSTASDARPPETPSGSKKKGEKQLQQPRFAFMTKTQIDNLEDGYRWRKYGQKAVKNSPFPRSYYRCTNNKCTVKKRVERSWEDPSIVITTYEGQHSHHSTVGFPRNGIINHGAPSQMSHPQFYYPLHLPIQNAPTFGQPLQYQTHDEALGSSSVMPHQGALLADIMPSVTKITWREIDLIMEKVAKNKHVIFKDYVIGYPKESDMYISSSTIELKVPRGSNAVLVKNLYLSCDPTMQFRMRNVVQGPSKSECYVPGSPINGFGVAKVVDSEHPNLRKGDLVWGTTKWEEYSVIQNPESLFKIQQTDVPLSYYTGILGMPGISAYAGLYEINPPRKGWHVFISAASGAVGQLVGQYAKLLGCYVVGTAGSQQKVDLLKHKLGFDEAFNYKEEPDLDAAIKRYFPQGIDLYFEQVGGKMLDAVLMNMKEHGCITVCGMISQYNIAEPEALKNLMQIVSKRLTIKGFTHRDHHHLYPKLLETVLPYIREKKVVYIEDTVEGLENGPAALVGLFSGRNFGKQVVAVAHE 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2801 605 SMART PKS_ER_names_mod 288 600 IPR020843 GO:0016491
Bisa01g2801 605 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 394 565 IPR036291 -
Bisa01g2801 605 SMART WRKY_cls 120 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2801 605 MobiDBLite consensus disorder prediction 43 110 - -
Bisa01g2801 605 Pfam N-terminal domain of oxidoreductase 268 381 IPR041694 -
Bisa01g2801 605 Pfam Zinc-binding dehydrogenase 427 559 IPR013149 -
Bisa01g2801 605 SUPERFAMILY WRKY DNA-binding domain 112 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2801 605 FunFam WRKY transcription factor 57 106 180 - -
Bisa01g2801 605 ProSiteProfiles WRKY domain profile. 115 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2801 605 MobiDBLite consensus disorder prediction 1 24 - -
Bisa01g2801 605 SUPERFAMILY GroES-like 265 432 IPR011032 -
Bisa01g2801 605 Gene3D - 270 600 - -
Bisa01g2801 605 Gene3D - 395 571 - -
Bisa01g2801 605 CDD double_bond_reductase_like 267 602 - -
Bisa01g2801 605 FunFam Prostaglandin reductase 2 395 571 - -
Bisa01g2801 605 MobiDBLite consensus disorder prediction 61 90 - -
Bisa01g2801 605 Gene3D WRKY domain 107 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa01g2801 605 Pfam WRKY DNA -binding domain 121 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa01g2801 605 PANTHER PROSTAGLANDIN REDUCTASE 266 602 IPR045010 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2801 Bisa-ChrBisa01 55978034 55985573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2801 10 251 WRKY Transcription Factor Family AT1G69310 46.263 9.81e-59 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa01g2801 ADH_zinc_N 2.9e-24 CL0063