Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2779 ATGGCGAGAAAAGTCCTTTGCTGTCTTCCACATAGACGCTTCTCTTCCACCCCTGACGTTCCAACTCTGTACTCCTTTCTTCAACCCTCCATCTTCGCCTTGAAAAGGAACCCTTCAGCGTCTCAAGAACCCACCAACCTCCCAACTTCACCACCAAAATCCTTAACTCCTGACCAAATATCCAACCTGCAAAATACACTTCAAAAGTCTCTCATAAGAAGTGATACGGATGAGGCTTGGAAATCTTTCAAGACTCTCACAAACAATTCAGCCTTCCCAAGTAAGTCCATCACCAATTCTCTCATCACCCACTTGTCCTCACATGGGGACATTAACAATCTCAAGAGGTCTTTTGCATCTGTAGTATATATCATAGAGAGGAACCCGAAAATATTAGATTTTGAAACAGTTCATACCATGCTTGATTCGATGAAATGTGCCAATCTCGGTACCCCTGCTTTTGCCATCGTCAAGTGCATGTTCAAGAACAGGTTTTTCGTTCCATTTAGTGTTTGGGGCAACGTACTTGTTGAAATTAGTCGCAAGAATGGTAACCTTGTTGCATTTTTACGCATTTTTGAAGAGAATTGTAGGGCTGCTTTGGATGAGAAATTGGAATTCATGAAACCTGACCTGGCTGCTTGTAATGGGGCACTAGAAGCGTCTTGTTGCGACCTTGAATCAGTGAGTGATGCTGTAAATGTTGTTGAAACTATGACACTTTTGGGTGTTAGACCAGACGAATCCAGTTTTGGATTTCTTGCTTATTTGTATGCATTGAAGGGGCTTGAAGAAAAGATAAATGAGTTAAAAATTTTGATGGGTGGGTTTGGTTTCTCAAACAAAAATGAATTCTATTGCAATTTAATTAGTGGGTATGTTAAGTCAGGCAATTTAGCATCCGTTGAGTCAACAATTCTCAAAAGTTTGACAGATAGAGATGGCAACAGTTGGAATTTTGGGGAAGAAACTTACTGTGAAGTAGTTAAGGGATATCTTCAGGGGGGAAATATCAAGGGATTAGCAAATTTAATTATTGAAGCTCAAAAGTTAGAGCCTTCAAATACTACGGTTGATAAATCTATTGGCTTTGGTATTGTTAGTGCATGTGTTAACACTGGATTATCAAACAAGGCACACAGCATTCTTGATGAAATGAATGCTCTGGGAGGCTCTGTGGGTCTTGGGGTCTACGTGCCAATCTTAAAGGCTTACTGCAAAGAAAATCGAACTGCTGAAGCTACTCAATTGGTCATGGAGATTAGTAATTCAGGTCTAAAATTGGATGTGGAAACATATGATGCTCTGATAGATTCATCCATGTCCAGCCAAGATTTTCAGTCAGCCTTTACATTGTTTAGGGATATGAGAGAGGCAAGGATTCCTAATTTGAAAGGGAGTTACCTAACTATAATGACTGGTTTGATGGAGAGCCGTCGACCTGAGTTGATGGCAGCTTTCTTAGATGAGGTGGCTGAGGACCCTCGAATTGAAGTAGGTATTCATGACTGGAATTCTATCATACATGCTTTCTGTAAAGTTGGGAGACTAGAAGATGCAAGAAGGACTTTCAGAAGGATGATATTCCTGCAATTTGAGCCAAATGATCAGACATATTTGTCCCTAATTAATGGGTATGTTCTGGCGCAGAAATATTTTAGTGTTCTAATGTTGTGGAATGAGGTGAAGCGAAAGTTATCAACAGACGGGCAGAAGGGGATCAAATTTGACCATAGTCTGGTTGATGCTTTCCTGTATGCTATGGTCAAGGGAGGTTTCTTTGATGCAGTTATGCAAGTTGTGGAGAAATCTAATGAAATGAAGATATTTGTTGATAAGTGGAGGTACAAGCAAGCATTCATGGAGACTCATAAGAAACTCAAAGTGCCAAAGTTGAGAAAAAGAAACTTTAGAAAAATGGAAGCACTTATCGCATTTAAGAATTGGGCTGGCTTAAATGCATGA 1965 0.4005 MARKVLCCLPHRRFSSTPDVPTLYSFLQPSIFALKRNPSASQEPTNLPTSPPKSLTPDQISNLQNTLQKSLIRSDTDEAWKSFKTLTNNSAFPSKSITNSLITHLSSHGDINNLKRSFASVVYIIERNPKILDFETVHTMLDSMKCANLGTPAFAIVKCMFKNRFFVPFSVWGNVLVEISRKNGNLVAFLRIFEENCRAALDEKLEFMKPDLAACNGALEASCCDLESVSDAVNVVETMTLLGVRPDESSFGFLAYLYALKGLEEKINELKILMGGFGFSNKNEFYCNLISGYVKSGNLASVESTILKSLTDRDGNSWNFGEETYCEVVKGYLQGGNIKGLANLIIEAQKLEPSNTTVDKSIGFGIVSACVNTGLSNKAHSILDEMNALGGSVGLGVYVPILKAYCKENRTAEATQLVMEISNSGLKLDVETYDALIDSSMSSQDFQSAFTLFRDMREARIPNLKGSYLTIMTGLMESRRPELMAAFLDEVAEDPRIEVGIHDWNSIIHAFCKVGRLEDARRTFRRMIFLQFEPNDQTYLSLINGYVLAQKYFSVLMLWNEVKRKLSTDGQKGIKFDHSLVDAFLYAMVKGGFFDAVMQVVEKSNEMKIFVDKWRYKQAFMETHKKLKVPKLRKRNFRKMEALIAFKNWAGLNA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2779 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 429 463 IPR002885 -
Bisa01g2779 654 Gene3D Tetratricopeptide repeat domain 349 461 IPR011990 GO:0005515
Bisa01g2779 654 Pfam Pentatricopeptide repeat domain 417 462 IPR002885 -
Bisa01g2779 654 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Bisa01g2779 654 MobiDBLite consensus disorder prediction 37 57 - -
Bisa01g2779 654 NCBIfam pentatricopeptide repeat 504 535 IPR002885 -
Bisa01g2779 654 Gene3D Tetratricopeptide repeat domain 30 274 IPR011990 GO:0005515
Bisa01g2779 654 Gene3D Tetratricopeptide repeat domain 462 618 IPR011990 GO:0005515
Bisa01g2779 654 PANTHER BNAC05G43320D PROTEIN 13 653 - -
Bisa01g2779 654 Pfam PPR repeat family 504 546 IPR002885 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2779 Bisa-ChrBisa01 55498705 55500669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2779 261 565 Miscellaneous Gene Families AT4G11690 24.918 2.43e-15 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2779 01 55498705 55500669 Bisa01g2779 01 55498705 55500669 ECH