Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2755 ATGCCCAGCTCGAGGAAAAAACCCTTCCACCTCTCTTCCTCTTCTTCTTCCTTTTCTTCTTTGTTCTGTATCATTCTCTTCCACGTTACTTTTCTTTATGGTCTGGCCTTCTCTGCAAATCATGAAGCTTCAGTTCTCTTCTCTTGGCTTCATAGCTCAGCTTCACCACCACCTTCGGCCTTCTTAAACTGGAACATCCTTGACACCAACCCATGCAACTGGACTTGCGTAACATGCTCCCCACAAGGTTTTGTCACTGAAATCAATATACAATCCATCCCTCTAGAGCTTCCCTTCCCTTCCAATATCTCCTCCTTTCCTTATCTTCAAAAACTTGTCATTTCTGAAGCCAATCTCACTGGAACCATCTCCAATAATATTGGTGACTGCTCTGCTCTTACCGTCCTTGAACTTAGCTTCAATAATCTTGTAGGATCTATCCCTGCAAGTATAGGCAAGCTTCAATCCTTGGAGAGCTTGTCTTTAAACTCCAATCAGCTTACAGGAAAAATCCCAGTTGAGCTAAGCGACTGCAGTAGCCTAAAAACTATCCTGCTTTTTGATAACCAATTAAGTGGGGCAATCCCACCTGAGCTTCGGAAGTTGTCAAAACTTGAAGTTGTCAGAGCAGGTGGAAATAAAGACATAGTTGGGAAAATCCCCGAAGAGCTTGGAGAATGTAGCAATTTGACTGTGTTGGGGCTTGCTGATACTAGGATATCAGGCTCATTACCAGCTTCATTGGGAAGATTGAGCAAGCTTCAGACGTTGTCCATCTATACTACAATGTTATCTGGTGAGATTCCACCTGAGTTAGGTAATTGCTCTGAACTTGTTGATTTGTTCCTGTATGAAAATATTCTATCAGGTTCTATTCCATCCGAGCTTGGTAAGCTCCAAAAGTTGGAACAGCTATTTTTGTGGCAAAACAATCTTGTGGGGGCTATCCCGGACGAGATTGGAAACTGTACAAGCTTGAGGAAAATTGATCTCTCATTGAATTCTTTATCTGGAACTATACCTTTGTCTTTCGGGGGTCTTTTGAAACTTGAGGAGTTCATGATTAGTGATAATAATGTGTCTGGTTCAATACCTTCAAGTCTTTCAAACGCTTCATATTTGCAACAGTTGCAAGTTGATACGAATCAACTCTCAGGTTTGATCCCACCAGAGCTTGGGAAGCTGTCAAAGCTCATAGTTTTCTTTGCTTGGCAGAACCAACTTGAAGGAAGCATTCCTTCTGCTTTGGAAAATTGCAGTAACCTACAATCACTGGATTTGTCTCACAATGCACTTACTGGTAGCATTCCTGCTGGCCTATTTCAGCTACGGAACCTTACAAAACTACTCTTGATTTCCAATGATATCTCAGGTTTAATACCATCAGAAGTAGGCAATTGTAGCTCTCTCATAAGGATGAGGCTTGGCAACAATAGAATTACTGGTGAGATTCCTGGGACTGTTGGGAGCCTCAAAAGCTTGAACTTTTTAGACCTCTCTAAGAATCGCCTTTCTGGGCAAGTCCCCTACGAGATTGGGGGATGCACAGAACTGCAAATGATAGACTTCAGTAGCAACAACTTAGAGGGTCCACTGCCTAATTCTTTGTCATCACTATCTACACTTCAGGTATTTGATGCATCTTCTAACAGATTTTCAGGTCAAATACCAGCAAGTTTGGGCCATCTTGAATCGCTAAACAAGCTAATCCTAAGCAGAAACTTGTTTTCTGGACCAATTCCTCCATCACTGAGCCTATGTTCGAGTCTCCAAATGCTTGATCTCAGTGGCAATGGGCTCACTGGAAGCATTCCAGCTGAGCTGGGTCATATTGAAACTCTTGAAATTGCTCTTAACCTCAGTTGCAATTCTCTTAGTGGATCAATCCCAGATCCAATTTCTTCTCTTACCAAGCTTTCTATGCTAGACCTTTCTCATAACCAGTTAGAGGGAGGTCTGAACTCACTTGCAGGGCTAGATAATCTTGTCTCTCTTAATATTTCCTACAACAAATTCACAGGCTATCTTCCAGATAATAAGCTTTTTAGGCAGTTATCACCAAAGGACCTAATTGGGAACCAAGGACTTTGCTCTTCAGGTCGGGACTCATGCTTTATGAGTGATTCTAGCAAGACAAATTTGAAACTGAATGAAAGTGATGCAAAGAAGTCATGGAAGATCCAGCTAGCTATTGGTTTGCTAGCAGTATTAACAGTTCTGATGGTGGTTATGGGGATAACTGCAGTGATAAAGGCACGAAGAACCGTCAGAGATGATGATTCAGAACTAGGAGATTCATGGCCATGGCAATTCATTCCGTTCCAGAAGCTTAACATTTCAGTGGAACAAGTGTTAAGATGTTTGGTTGATGGAAACATAATTGGAAAAGGGTGTTCTGGTGTTGTTTATCGAGCTGAAACAGACAATGGTGAGGTCATTGCTGTGAAGAAACTGTGGCCAACTACAATGGATGCAGGGGAGGGGTTCAAGGATGATCAAAGTGGAATACGTGACTCATTCTCAGCAGAGGTGAAAACACTTGGCTCAATTCGCCACAAGAACATTGTTAGATTTTTGGGTTGTTGTTGGAATAGAAACACAAGATTGTTGATATATGATTATATGCCTAATGGGAGTCTGAGTAGTATACTTCATGAGAGAACTGGAAATTTCCTGGAATGGGAACTAAGGTATAGAATTCTGTTAGGGGCTGCAGAAGGCCTTGCTTATCTGCACCATGATTGTATGCCTCCAATAGTACACAGAGACATTAAAGCCAATAACATCCTCATTGGCCTTGAATTTGAGCCTTACATTGCTGACTTTGGTTTGGCTAAGCTTGTTGATGATGGTGGTTTTGGTCGGTCCTCCAATACAATTGCTGGTTCTTATGGATACATTGCTCCAGAATATGGCTACATGATGAAGATCACAGAGAAGTGTGATGTTTACAGCTATGGCGTCGTGTTGTTGGAAGTCTTGACAGGTAAGCAACCGATAGATCCGACAATACCAGATGGGCAACACGTGGCAGATTGGGTGAGACAGAGAAGAGGAGTTGAAGTGCTTGACCCTAGCTTACTGTCAAGACCAGAATCAGAGATAGAGGAGATGATGCAGGCACTAGGAATAGCCTTGTTGTGTGTGAATTCATCCCCAGATGAGAGGCCAACAATGAGAGATGTTGCAGCAATGCTAAAAGAGATCAAGCATGAGAGGGAGGAATATGCAACAAAAGTTGATGTGCTTCTAAAGGGGTCTCCTGCAAATGATGTTCTAGCAACGTCTTCTTCATTTCCAGCAATGTGCCCAGAAAGCAACAACACAATATTCTCTGTGTCTTCTCTGCTTCATTCATCTTCTTCCAGCGCCAAAGTGGGTCTCAAGTGA 3390 0.4236 MPSSRKKPFHLSSSSSSFSSLFCIILFHVTFLYGLAFSANHEASVLFSWLHSSASPPPSAFLNWNILDTNPCNWTCVTCSPQGFVTEINIQSIPLELPFPSNISSFPYLQKLVISEANLTGTISNNIGDCSALTVLELSFNNLVGSIPASIGKLQSLESLSLNSNQLTGKIPVELSDCSSLKTILLFDNQLSGAIPPELRKLSKLEVVRAGGNKDIVGKIPEELGECSNLTVLGLADTRISGSLPASLGRLSKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENILSGSIPSELGKLQKLEQLFLWQNNLVGAIPDEIGNCTSLRKIDLSLNSLSGTIPLSFGGLLKLEEFMISDNNVSGSIPSSLSNASYLQQLQVDTNQLSGLIPPELGKLSKLIVFFAWQNQLEGSIPSALENCSNLQSLDLSHNALTGSIPAGLFQLRNLTKLLLISNDISGLIPSEVGNCSSLIRMRLGNNRITGEIPGTVGSLKSLNFLDLSKNRLSGQVPYEIGGCTELQMIDFSSNNLEGPLPNSLSSLSTLQVFDASSNRFSGQIPASLGHLESLNKLILSRNLFSGPIPPSLSLCSSLQMLDLSGNGLTGSIPAELGHIETLEIALNLSCNSLSGSIPDPISSLTKLSMLDLSHNQLEGGLNSLAGLDNLVSLNISYNKFTGYLPDNKLFRQLSPKDLIGNQGLCSSGRDSCFMSDSSKTNLKLNESDAKKSWKIQLAIGLLAVLTVLMVVMGITAVIKARRTVRDDDSELGDSWPWQFIPFQKLNISVEQVLRCLVDGNIIGKGCSGVVYRAETDNGEVIAVKKLWPTTMDAGEGFKDDQSGIRDSFSAEVKTLGSIRHKNIVRFLGCCWNRNTRLLIYDYMPNGSLSSILHERTGNFLEWELRYRILLGAAEGLAYLHHDCMPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGGFGRSSNTIAGSYGYIAPEYGYMMKITEKCDVYSYGVVLLEVLTGKQPIDPTIPDGQHVADWVRQRRGVEVLDPSLLSRPESEIEEMMQALGIALLCVNSSPDERPTMRDVAAMLKEIKHEREEYATKVDVLLKGSPANDVLATSSSFPAMCPESNNTIFSVSSLLHSSSSSAKVGLK 1129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2755 1129 SUPERFAMILY L domain-like 49 408 - -
Bisa01g2755 1129 Pfam Leucine rich repeat 444 504 IPR001611 GO:0005515
Bisa01g2755 1129 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Bisa01g2755 1129 Pfam Leucine rich repeat 618 672 IPR001611 GO:0005515
Bisa01g2755 1129 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 875 1083 - -
Bisa01g2755 1129 ProSiteProfiles Leucine-rich repeat profile. 421 443 IPR001611 GO:0005515
Bisa01g2755 1129 SUPERFAMILY L domain-like 388 706 - -
Bisa01g2755 1129 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 438 532 - -
Bisa01g2755 1129 Pfam Leucine rich repeat N-terminal domain 39 80 IPR013210 -
Bisa01g2755 1129 ProSiteProfiles Protein kinase domain profile. 788 1074 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2755 1129 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g34110 771 874 - -
Bisa01g2755 1129 FunFam Putative LRR receptor-like serine/threonine-protein kinase 617 702 - -
Bisa01g2755 1129 SUPERFAMILY Protein kinase-like (PK-like) 766 1067 IPR011009 -
Bisa01g2755 1129 SMART serkin_6 788 1070 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2755 1129 SMART LRR_typ_2 154 178 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 491 515 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 636 658 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 659 684 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 419 443 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 563 587 IPR003591 -
Bisa01g2755 1129 SMART LRR_typ_2 299 323 IPR003591 -
Bisa01g2755 1129 SMART LRR_sd22_2 154 175 - -
Bisa01g2755 1129 SMART LRR_sd22_2 419 448 - -
Bisa01g2755 1129 SMART LRR_sd22_2 515 541 - -
Bisa01g2755 1129 SMART LRR_sd22_2 636 661 - -
Bisa01g2755 1129 Pfam Protein kinase domain 791 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2755 1129 Gene3D Ribonuclease Inhibitor 196 289 IPR032675 -
Bisa01g2755 1129 Gene3D Ribonuclease Inhibitor 290 390 IPR032675 -
Bisa01g2755 1129 Gene3D Ribonuclease Inhibitor 38 195 IPR032675 -
Bisa01g2755 1129 FunFam LRR receptor-like serine/threonine-protein kinase 537 612 - -
Bisa01g2755 1129 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 214 437 - -
Bisa01g2755 1129 Gene3D Ribonuclease Inhibitor 392 713 IPR032675 -
Bisa01g2755 1129 FunFam Nuclear pore complex protein NUP107 39 197 - -
Bisa01g2755 1129 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 288 1066 - -
Bisa01g2755 1129 PRINTS Leucine-rich repeat signature 422 435 - -
Bisa01g2755 1129 PRINTS Leucine-rich repeat signature 636 649 - -
Bisa01g2755 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 919 931 IPR008271 GO:0004672|GO:0006468
Bisa01g2755 1129 Gene3D Transferase(Phosphotransferase) domain 1 876 1086 - -
Bisa01g2755 1129 ProSitePatterns Protein kinases ATP-binding region signature. 794 817 IPR017441 GO:0005524
Bisa01g2755 1129 Gene3D Phosphorylase Kinase; domain 1 794 875 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2755 Bisa-ChrBisa01 54760240 54764137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2755 37 1071 Receptor kinase-like Gene Family AT5G56040 48.190 0.0 963
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa01g2755 Pkinase 1.3e-42 CL0016