Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2750 ATGAACCTTGAAGACAAAGTTGGCACCATGGACATGGTTTCCCCCTCTGAACACTTCTGCTATGTGCGTTGCAACTTCTGCAACACTGTGCTTGCGGTTGGTATGCCATGCAAACGATTGCAAGACACTGTGACGGTGAAGTGCGGCCATTGTAGCAACCTCTCCTATCTTAGCACCACCAGGCCTCCCTCTCACACCATTAATCACACACTACACACTCCTCAGGAGAAAGGGTTTTACAGTGAATTGAAGAAGGGGCAAGCATCGTCTTCATCTTCGTCGTCTACAACTACATCTGGCGACCCAGTCTCCCCAAAAGCATCAACTTTTGTTGCGAAACGTAGTTAA 348 0.4828 MNLEDKVGTMDMVSPSEHFCYVRCNFCNTVLAVGMPCKRLQDTVTVKCGHCSNLSYLSTTRPPSHTINHTLHTPQEKGFYSELKKGQASSSSSSSTTTSGDPVSPKASTFVAKRS 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2750 115 MobiDBLite consensus disorder prediction 84 105 - -
Bisa01g2750 115 Pfam YABBY protein 15 97 IPR006780 GO:0007275
Bisa01g2750 115 MobiDBLite consensus disorder prediction 61 75 - -
Bisa01g2750 115 MobiDBLite consensus disorder prediction 61 115 - -
Bisa01g2750 115 PANTHER PROTEIN YABBY 6-RELATED 13 95 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2750 Bisa-ChrBisa01 54585313 54586147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2750 1 86 C2C2-YABBY Transcription Factor Family AT1G69180 54.545 2.20e-23 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa01g2750 YABBY 2.3e-21 CL0114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2750 01 54585313 54586147 Bisa01g2750 01 54585313 54586147 ECH