Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2749 ATGGAATCTTGGAGTTACGCCTCAGAAGAGAAAGGTTATATGTTTTCTGATGAAATGGATTTTTCCCTTGATGCTTTTATGAGAAGCAGAAGAGCAATGGTGGAATGGGACAGTAAAGCCCCTTGTAATTTTGAGAAAGATGGATTTCTTTCAGATAAAGAGGTAGCGAAGAGCATGGAGTATGTGGACTTGGGGTTTCCTGATGTGTTCAGAAGGCCTGTTCATGGTAACCAGCCAATGGAAGCATTATCCTGTGAGCAAGATAGTAACTTTAGTAGTAAGAAAATGAACTCTTCTCATGTTATTGCTTTAAATTTGCCTTTGGGGGAACAAGATTCTGTGTCAAAGCATTCATGTTCTCTAGTTGAATCTAAAAGTCATGATTCATCATTGATTGATTTGAAGCTAGGGAGATTAGCAGATTGTAAAGATGCAAGTAGTGATAAAAATGACACAGATAGGTTCACTTTTTCATCTGTATATCCACCCAAGCTTGCAAAGAGAGCTCGAACGTTCAGCTCGCCTACTCAGAAGCCTGTTTGTCAAGTTTATGGTTGTAACATGGATCTCAGCTCCTCAAAAGATTACCACAAGAGGCACAAAGTTTGTGATGTTCATTCCAAGACCCCCAAAGTTATCGTTAATGGAATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGATGGTAAGCGCAGTTGTCGTAGACGCCTAGCAGGACACAATGAACGTCGAAGAAAGCCTCAGTTTGATTACATCTCTGGTAAACCACAGATGCTTCAGTCATGTCAAGGTATCAACAAATATTTTGGGGCTTCATTCCAGAAGAGACCTCAGTTTGCTTTTCAAGACATGATTCGAAGTAGCTTTTATTACTCAGGAAAGTATGAACAAACCAATCAGAGTGGACCTATCAAATTTGAAGATGAATCAATTTACAGTCCTCAACTTGCAGTACCCATAACACATGGTGAAGAGTTATCCAGGGCCTCCAACTCTAGCAGCTGTGCTCTCTCTCTTCTGTCATCTCAGTCACAGGATCTGCCGCGCCACTCAGCCAGTTCCCTTATTTCTCAGGGCATCAGCTCGGGACAACCCATTGATGTCCCAGTTTCTGAAACACTTTTTGGGGTAAGCTCTGTGGATAATTGTGTCCCAAATGAGTCCTTTTCATGTGGGATAAATTCTATGGAAGTCACTAAGAACGCATCCATCATGCTTTGTGATGCTGGCCAGGCTCTTCAACTTAAAGTCCATGGAGATGATATTTGCCAACCATCAGACCCATTAAATGTCAACAAGTATTGTCCTGCCCCTGAACATGGAGCCACAGTTGATTTATTCCAGTTGTCATCGCATCTTCAAAGGGTGGAGCAGCAAAGAAATTCCTTCCCAGTAAAGCGTGAAAATGAGGACAGCTGCTTTTTTTCAACCGAGTGA 1461 0.4196 MESWSYASEEKGYMFSDEMDFSLDAFMRSRRAMVEWDSKAPCNFEKDGFLSDKEVAKSMEYVDLGFPDVFRRPVHGNQPMEALSCEQDSNFSSKKMNSSHVIALNLPLGEQDSVSKHSCSLVESKSHDSSLIDLKLGRLADCKDASSDKNDTDRFTFSSVYPPKLAKRARTFSSPTQKPVCQVYGCNMDLSSSKDYHKRHKVCDVHSKTPKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKPQMLQSCQGINKYFGASFQKRPQFAFQDMIRSSFYYSGKYEQTNQSGPIKFEDESIYSPQLAVPITHGEELSRASNSSSCALSLLSSQSQDLPRHSASSLISQGISSGQPIDVPVSETLFGVSSVDNCVPNESFSCGINSMEVTKNASIMLCDAGQALQLKVHGDDICQPSDPLNVNKYCPAPEHGATVDLFQLSSHLQRVEQQRNSFPVKRENEDSCFFSTE 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2749 486 ProSiteProfiles Zinc finger SBP-type profile. 178 255 IPR004333 GO:0003677
Bisa01g2749 486 Pfam SBP domain 181 254 IPR004333 GO:0003677
Bisa01g2749 486 Gene3D - 173 242 IPR036893 GO:0003677|GO:0005634
Bisa01g2749 486 SUPERFAMILY SBT domain 179 260 IPR036893 GO:0003677|GO:0005634
Bisa01g2749 486 FunFam Squamosa promoter-binding-like protein 14 172 242 - -
Bisa01g2749 486 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 129 269 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2749 Bisa-ChrBisa01 54570147 54574220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2749 132 469 SBP-box Gene Family AT1G69170 38.776 4.34e-55 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa01g2749 SBP 3.3e-32 No_clan