Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2738 ATGTTCCAAAAACGGAAAGTGCGCCGTTGCCGGGGATCGAACCCGGGTCACCCGCGTGACAGGCGGTACACTAAAATACTGAGGCTAAATAGAGTGTCTACTTCATTAGTCCCTGAAGCAGAAGAAGAAGCAGCACCTGAAGATGTAGAATTTGTTATTAATGGATCACTAGAATCTGCTGCACCTCAGCTTATCCATTCCAATTCATCACTTGACACACAAGGAACATTTGAAGCCGCCGCTCTTTATTCTAGTTCTTCAGAAGAGTCTTGTTCTACATGCTTTGAAAGATATAGTGAGGAAAATCCAAGAATAACTGCAGAGTGCTCTCACCATTTCCACCTTCCCTGCATATATGAATGGATGGAGAGAAGTGACACTTGTCCATTTTGTAGACAGCTGTTGAAACTGGGAGAAGGATTTGAAAGCCGGTGTTTAGGTCTATGGGGACATGAGGTTTCTCATGACCTGTTGGCCAATCACCTATGCACCTGCGAAACTCAAGAGCTTTGCCCATTCGCTGCCACTGTTACACCTCCGAGCTTTGAATCTGGTATATGTTGGTGCTGGGAACGTCGAAGAGATGGGACTGTCGTCGAACGCCTCCCTCCATCGCGAATCAACCGCATGGTCGTCGGAGAAGACGTCCCCCAGTCACGGCGACCAACAGACGAGCACGCCACCTCCCTGGAAAAACAAAACCGCCTTCAGCTTTCTCCCAACTGCCACAAGCTGAAGACTCCTAGCAGAAAAGTATCAACTAAATTCCGAAAAAGCGAAGAGTGA 786 0.4771 MFQKRKVRRCRGSNPGHPRDRRYTKILRLNRVSTSLVPEAEEEAAPEDVEFVINGSLESAAPQLIHSNSSLDTQGTFEAAALYSSSSEESCSTCFERYSEENPRITAECSHHFHLPCIYEWMERSDTCPFCRQLLKLGEGFESRCLGLWGHEVSHDLLANHLCTCETQELCPFAATVTPPSFESGICWCWERRRDGTVVERLPPSRINRMVVGEDVPQSRRPTDEHATSLEKQNRLQLSPNCHKLKTPSRKVSTKFRKSEE 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2738 261 SMART ring_2 91 131 IPR001841 -
Bisa01g2738 261 ProSiteProfiles Zinc finger RING-type profile. 91 132 IPR001841 -
Bisa01g2738 261 Pfam RING-H2 zinc finger domain 85 132 IPR024766 GO:0008270
Bisa01g2738 261 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 137 IPR013083 -
Bisa01g2738 261 MobiDBLite consensus disorder prediction 212 233 - -
Bisa01g2738 261 MobiDBLite consensus disorder prediction 1 20 - -
Bisa01g2738 261 SUPERFAMILY RING/U-box 86 137 - -
Bisa01g2738 261 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 53 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2738 Bisa-ChrBisa01 54393494 54404015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2738 13 139 C3H Transcription Factor Family AT5G15790 34.965 1.14e-18 80.5