Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2723 ATGAGAGCAGGGAAAGGGAATCAGGAAGACGAGGAGTACGAGGAGGAAGAGTTCGGCTCTAAGAAAGGCCCTTCCTCTGCGCCTAATAGCAATAATGCTAACGACGATGCAAAAGCCATTGATAAGGCTAGTGCAATAAGATCAAAACATTCAGTAACCGAGCAGCGGAGAAGAAGCAAGATAAATGAGAGATTCCAGGTATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACAGCATCATTCTTACTAGAGGTGATTGAGTATGTCCAGTACTTACAGGAGAAGGTACAGAAGTATGAAGGATCATATCAAGGTTGGGGTAACGAGCCCACAAAGTTGATGCCATGGAGAAACAGCCACTGGCGTGTCCAAAGTTTTGTTGGCCAGCCTCAACCTGTCAATAACGGTTCAGGTCCATTATCACCTTTTCCTGGAAAGTTTGACGAGGGCAACCTTAGTGTCTCTCCAACATTGTTTAGTGGCACCCAGAATATGATAGATCCTGATCAAAGCAGGGATGTTGTCAGCAAAACAGCTGAGAGGCAACCTGAGTTAGTGAGCAAGAGAGTACCTACACCAATGCCTACACAAGCCAACATGTCTGTTCCTGTTAGAAGTGATGGTGTACATGCCCATCCTCTACAGGGGACTGTTTCTAATGCACAATTAACTGAATGTCCAGCCACAATTGATCCACAAAGCCAGCATGATGAGCTGACAATTGAAGGAGGAACAATTAGCATCTCAAGTGTGTACTCTCAGGGACTGTTGAACAATCTGACTCAAGCTCTACAGAGTGCCGGTTTAGATCTGTCACAGGCTAGCATCTCTGTTCAGATTAACCTTGGGAAGCGGGCCAACAATGAACTGAGCTGTGGGACATCCACTCCCAAGAATCATGATAATCTCCCTTTTAGCAATCAAGCATTTCCACATTTTAGAGACGCAGGCTGTGGCGAAGACTCTGAACAAGCTCAGAAACGATTAAAAACATAA 1005 0.4517 MRAGKGNQEDEEYEEEEFGSKKGPSSAPNSNNANDDAKAIDKASAIRSKHSVTEQRRRSKINERFQVLRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGNEPTKLMPWRNSHWRVQSFVGQPQPVNNGSGPLSPFPGKFDEGNLSVSPTLFSGTQNMIDPDQSRDVVSKTAERQPELVSKRVPTPMPTQANMSVPVRSDGVHAHPLQGTVSNAQLTECPATIDPQSQHDELTIEGGTISISSVYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANNELSCGTSTPKNHDNLPFSNQAFPHFRDAGCGEDSEQAQKRLKT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2723 334 MobiDBLite consensus disorder prediction 40 58 - -
Bisa01g2723 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 43 116 IPR036638 GO:0046983
Bisa01g2723 334 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 7 334 IPR044295 GO:0003700|GO:0006351|GO:0046983
Bisa01g2723 334 SMART finulus 51 101 IPR011598 GO:0046983
Bisa01g2723 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 45 95 IPR011598 GO:0046983
Bisa01g2723 334 MobiDBLite consensus disorder prediction 296 334 - -
Bisa01g2723 334 MobiDBLite consensus disorder prediction 1 58 - -
Bisa01g2723 334 MobiDBLite consensus disorder prediction 319 334 - -
Bisa01g2723 334 MobiDBLite consensus disorder prediction 23 37 - -
Bisa01g2723 334 Gene3D - 43 115 IPR036638 GO:0046983
Bisa01g2723 334 Pfam Helix-loop-helix DNA-binding domain 47 96 IPR011598 GO:0046983
Bisa01g2723 334 CDD bHLH_AtBIM_like 44 120 - -
Bisa01g2723 334 FunFam BHLH domain class transcription factor 43 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2723 Bisa-ChrBisa01 54043049 54053979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2723 1 334 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 55.389 8.49e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g2723 HLH 2.3e-13 No_clan