Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2700 ATGAGTTATTCAACTAGTATGCCCTTGGATTGGAGATTTGCGGGTGCTAATCTTGCAAATACATCAGTTGGTTTGGTGGACTCATATGTTCCAAACTTCTGGGATCATCCCATAAATCCCCAAAACTTGGGATTGTTTGACATCAGTGTTCACAAAAATGGTAGCTCCTCAAACCCAATTGTGAACAGAAAAGATGACCTTGCCTTTTCAAGAGCTGGTCATGATAAAACACTTGAAATGGCCTGGAACCCAGCAAATTCTGTTTTGAAAGGGGATGCCTTCTTACCAAATGGACCAGCAATATTTCCAGAGAGTTTAACTTATATTCCCACTGATTTTGGATTCATCGAGCGAGCTGCGAGATTCACATGCTTTAATGGAGGAAATTTTGGTGATATGATGAACTCATTTGGGATTCCTCAATCCATGTGTCCTTATGCTAGCCAAGATACCCTTGCAGGCCATGGGCTAAAACCAGTACATGGAGGACAATCTCAAGAAAGTGTAGGTGAACAAGCTGCAAAAGATGTGTCTCCATCTGCTCAGAATTTGGCTACTGAAGGAAGCTCACTCAAGAATGACAAGAGAAGTGAAAGCCTTGTAACATCTCAAGATGAAGCAAAACAAACTCTTGGCAGCTCTGTTAATGAGTCTAATAGAGGAGAATCAAGTAATGATGATGATGCTGGTGGTCAAGATGATATGCCAATGTTAGAGGGTACGAGTGGGGAGCCTTCTAACATAGGAGTAAACTCAAAGAAAAGGAAAAGAAGTGGGCAGGATGCTGATAATGAAAAAGCCAATGGAGCTCCTGAACCACGAAGTGAAGCTGCAATGGACAATTCTGAGAGACCAACTTCCACAAAGACTTCAGGGAAGAATGCCAAACAGGGTTCACAAGTGTCTGATCCTGCAAAGGAGGAATACATACATGTCAGGGCTCGCAGGGGTCAAGCAACAAATAGCCATAGTCTTGCAGAGAGAGTAAGAAGGGAAAAGATCAGCGGAAGGATGAAGTTTCTTCAAGACCTTGTACCTGGATGCAGCAAGGTCACTGGCAAGGCCGTGATGCTAGATGAAATCATCAACTATGTACAGTCACTTCAACGACAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATTCTCGGCTGGATTTTAAAGTTGAAGGACTTCACGCTAAAGATATTGTTCAGCAACGGCCTGGCCCTTCATCTGCATTGGGTTTCTCTCCGGAAATGCCTCCAGTTCTTCCTCCCTTACATTCAACTCAACCAGGACTGCTGCAGTCATATCTTCCTGGCATGGCAAACTCATCCGATATACTTCGTAGAACCATTCATCCACAGTTAGCTTCCTTGACTGGAGGATTCAAGGACCCTAATCAGCTACCGGATATGTGGGAGGATGAGCTGCACAATGTTGTACAGATAACCTTTGCAACAACTGCTCCACTGAGTAGCCAAGATGTTGATGGTGATGCGCCAGAAGGTGAGATGAAAGTTTAA 1512 0.4358 MSYSTSMPLDWRFAGANLANTSVGLVDSYVPNFWDHPINPQNLGLFDISVHKNGSSSNPIVNRKDDLAFSRAGHDKTLEMAWNPANSVLKGDAFLPNGPAIFPESLTYIPTDFGFIERAARFTCFNGGNFGDMMNSFGIPQSMCPYASQDTLAGHGLKPVHGGQSQESVGEQAAKDVSPSAQNLATEGSSLKNDKRSESLVTSQDEAKQTLGSSVNESNRGESSNDDDAGGQDDMPMLEGTSGEPSNIGVNSKKRKRSGQDADNEKANGAPEPRSEAAMDNSERPTSTKTSGKNAKQGSQVSDPAKEEYIHVRARRGQATNSHSLAERVRREKISGRMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNSRLDFKVEGLHAKDIVQQRPGPSSALGFSPEMPPVLPPLHSTQPGLLQSYLPGMANSSDILRRTIHPQLASLTGGFKDPNQLPDMWEDELHNVVQITFATTAPLSSQDVDGDAPEGEMKV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2700 503 MobiDBLite consensus disorder prediction 155 305 - -
Bisa01g2700 503 MobiDBLite consensus disorder prediction 203 220 - -
Bisa01g2700 503 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 196 418 IPR024097 GO:0006355
Bisa01g2700 503 SMART finulus 324 374 IPR011598 GO:0046983
Bisa01g2700 503 Gene3D - 315 391 IPR036638 GO:0046983
Bisa01g2700 503 FunFam Basic helix-loop-helix transcription factor 315 387 - -
Bisa01g2700 503 CDD bHLH_AtBPE_like 308 393 - -
Bisa01g2700 503 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 368 IPR011598 GO:0046983
Bisa01g2700 503 MobiDBLite consensus disorder prediction 280 301 - -
Bisa01g2700 503 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 316 386 IPR036638 GO:0046983
Bisa01g2700 503 Coils Coil 365 385 - -
Bisa01g2700 503 MobiDBLite consensus disorder prediction 250 270 - -
Bisa01g2700 503 MobiDBLite consensus disorder prediction 165 190 - -
Bisa01g2700 503 Pfam Helix-loop-helix DNA-binding domain 321 369 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2700 Bisa-ChrBisa01 53251548 53254764 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2700 25 482 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 42.495 1.28e-92 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g2700 HLH 2.6e-05 No_clan