Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2682 ATGGAAATGAAAGGGTTTGTGGGTTTCTTTTGCTTGGTCTTGTTGAGCTTGTGGGGTTCAGTGTCTGGTTTGCTTTCTCCTAAAGGTGTAAACTTTGAAGTGCAAGCTCTTATGCATATTAAGGCTTCTCTTGTGGATCCTCATGCTGCTCTTTATAACTGGGATGATAATGCTGTGGATCCTTGTAGTTGGGCCATGGTCACTTGTTCTCCTGATCGTTTTGTCATTGCCCTGGGAATTCCGAGCCAGAACATATCTGGGATTCTGTCACCAAGCATTGGAAACTTGACAAATCTTCAGACTATGCTCCTACAGGATAATAATATATCAGGACCAATTCCCTCTGAGATTGGGAGGCTCCGAAATCTTGAAACTCTTGATCTTTCTGATAATTCCTTCACTGGTCGACTTCCTGATAGTTTTTCCCAAATGAAGAGTCTTCATTATCTGCGGCTAAATAATAATAGTCTCACTGGGGCAATTCCATCCTCTTTGGCTAGCATGACTCAGCTTGCCTTTCTGGATGTCTCTTACAATAACTTGAGTGGACCTGTGCCCACAATAAATGCAAAAACATTCAATATTGTGGGAAATTCCCAGATATGTGCCACTGGAACTGAGAAAAACTGCTTTAGGACAAGTCTACTTTTTTCTTCCTTGAATAATTCTCAAGAATCACAATCCTCTGGCAGACCTAAAAATCACAAACTTGCCTTGGCATTTGCCTCAAGCCTGAGCTGCATCTGCCTACTGATTCTTGGGTTTGGATTCCTCCTATGGTGGAGACAAAGATATAGCAAGCAAATTTTCTTTGATATGAATGAGCAGCACTGGGAAGAAATCTGCCTTGGAAACCTCAAGAAATTTCATTTCAGAGAACTTCAGGTTGCTACAAGTAACTTCAGCGGCAAGAACTTGATTGGAAAAGGTGGATTTGGAAATGTGTACAAAGGGTATCTCTCGGACGGTACAGTTATAGCAGTAAAGAGACTTAAAGATGGAAATGCCATTGGAGGTGAGATCCAATTCCAGACTGAAGTAGAGATGATAAGCTTAGCCGTGCACCGAAACCTCCTTCGCCTCTATGGATTTTGTATGACAGCCACTGAGAGGCTCTTGATTTATCCCTACATGTCTAATGGCAGTGTTGCTTCACGTCTTAAAGCCAAGCCTGTTCTAGATTGGGGTACAAGGAAGAGGATAGCCTTAGGAGCAGCTAGAGGTTTGCTATATTTGCATGAGCAATGTGACCCCAAGATTATTCACAGGGATGTGAAGGCTGCAAATATCTTGCTTGATGATTATTGTGAGGCTGTGGTAGGAGATTTTGGGTTGGCAAAGCTGTTGGATCACCATGACTCACATGTGACAACAGCTGTCAGAGGCACCGTAGGGCACATAGCCCCTGAGTATCTCTCCACAGGCCAGTCCTCTGAGAAAACAGATGTGTTTGGATTTGGGATTCTTCTTCTTGAATTAATCTCTGGTCAAAGAGCACTTGAATTTGGGAAAGCAGCAAACCAAAAAGGAGCCATTCTTGATTGGGTGAAGAAGATTCATCAAGAGAAGAAACTTGACTTGTTAGTTGACAAGGACCTGAAAAACAACTATGATAAAATTGAGCTTGAAGAAATTGTTCAAGTAGCTCTTTTGTGTACTCAGTACCTTCCTAGTCATAGACCAAAGATGTCTGAAGTGGTTCGGATGCTTGAAGGAGATGGGCTTGCTGAGAAATGGGAAGCTTCACAGAGAGCTGAATCAACAAGAAGCAAAGGGAATGAACTCTCTTCTTCAGAACGATACTCAGATCTTACCGACGACTCTTCATTGCTTGCCCAGGCAATGGAGCTTTCTGGACCAAGGTGA 1866 0.4277 MEMKGFVGFFCLVLLSLWGSVSGLLSPKGVNFEVQALMHIKASLVDPHAALYNWDDNAVDPCSWAMVTCSPDRFVIALGIPSQNISGILSPSIGNLTNLQTMLLQDNNISGPIPSEIGRLRNLETLDLSDNSFTGRLPDSFSQMKSLHYLRLNNNSLTGAIPSSLASMTQLAFLDVSYNNLSGPVPTINAKTFNIVGNSQICATGTEKNCFRTSLLFSSLNNSQESQSSGRPKNHKLALAFASSLSCICLLILGFGFLLWWRQRYSKQIFFDMNEQHWEEICLGNLKKFHFRELQVATSNFSGKNLIGKGGFGNVYKGYLSDGTVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTATERLLIYPYMSNGSVASRLKAKPVLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHHDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAILDWVKKIHQEKKLDLLVDKDLKNNYDKIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTRSKGNELSSSERYSDLTDDSSLLAQAMELSGPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2682 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 581 - -
Bisa01g2682 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Bisa01g2682 621 Pfam Leucine rich repeat 121 181 IPR001611 GO:0005515
Bisa01g2682 621 SUPERFAMILY L domain-like 33 195 - -
Bisa01g2682 621 MobiDBLite consensus disorder prediction 588 612 - -
Bisa01g2682 621 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Bisa01g2682 621 SUPERFAMILY Protein kinase-like (PK-like) 278 571 IPR011009 -
Bisa01g2682 621 Pfam Protein kinase domain 304 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2682 621 MobiDBLite consensus disorder prediction 580 621 - -
Bisa01g2682 621 FunFam Putative LRR receptor-like serine/threonine-protein kinase 30 212 - -
Bisa01g2682 621 FunFam Somatic embryogenesis receptor-like kinase 1 378 590 - -
Bisa01g2682 621 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Bisa01g2682 621 ProSiteProfiles Protein kinase domain profile. 301 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2682 621 FunFam Somatic embryogenesis receptor kinase 1 270 377 - -
Bisa01g2682 621 Gene3D Ribonuclease Inhibitor 30 212 IPR032675 -
Bisa01g2682 621 SMART serkin_6 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2682 621 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Bisa01g2682 621 Gene3D Transferase(Phosphotransferase) domain 1 378 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2682 Bisa-ChrBisa01 52474148 52478086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2682 6 621 Receptor kinase-like Gene Family AT5G16000 73.760 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa01g2682 Pkinase 3e-43 CL0016