Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2646 ATGAAAAGGGAGGAAGATCATGGGCAGTGTTCATCACAAGCCATAAACAGCTTCCAGAGTTATCAGGAGCAGCTCCTTCTCCAACAGATGCAGCATCAGCAACAGAACACCATGTATCCAGAAGTTTCTCCACTTTTGCAGCCATGGGCCATCCCTCCGGTTCACTCTTCCTTCAACCCGGCGACTCACTTCCCCGGCCCGGCCCGGCCCGACCACGACCCCTTCCTCCTCCCTCCGCCGCCGCCTCCCCCTGTGCCCTACTCCAGCTTCTTCAATAGGAGGGTCCCCTCCCTCCAGTTTGCATACGACGCTTCGTCTTCCGACCACCTCCGGATCCTCTCCGATGCCCTCGGACCCGTGGTTCAACCCGGCTCAGCCCCCTTCGGCCTCCAGGCCGAGCTGGGCAAGATGACGGCTCAAGAGATCATGGACGCCAAGGCTCTCGCTGCGTCTAAGAGTCATAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTTGCTAAGCTTCGAAGCTTATTGCCCAGTACAACCAAAACGGATAAAGCGTCACTACTAGCAGAAGTGATACAGCACGTGAAGGAGCTGAAGCGGCAGACATCACTAATAGCAGAAACGAGCCCGGTGCCGACGGAGGTGGATGAGCTGATGGTGGACGCGGCGGATGAGGACGGGAAGTTCGTGATAAAAGCGTCGTTTTGCTGCGAGGACAGGTCAGATCTGTTGCCGGAGCTCATCAAGACGCTCAAGGCCCTGAGACTCAGAACCCTCAAGGCCGAGATCACTACGCTGGGAGGGCGCGTGAAGAACGTGCTCTTCATCACCGGAGAGGAAGACGACTCGTCGGCGACGAGCGGTGGCAGTGGGGACCACCAGAGCCAATACTGCATAAGCTCCATACAAGAAGCTCTTAGGGCTGTGATGGAGAAGAGTAGTGGTGGTGGGGATGAGATCACTGCGAATGGGAGTGTTAAGAGACAAAGGACTAATAACCTCAACAAACGTATATACATGGATCGTGACCCTGTGAGGAGATACAGTGAAGGTCATGTGCTTACGTCCCCACCCAGGACCACCGGTAGTGCTATAGCCTATAAGTGGCATAACCACCAGCATCTGCATCCACCAACCTCTTCTCCCTCCGTACAATGGTGTTCTAGGTTTAAATTTAATCATCATGCTACCATTACAGTACCATGTGCTTTACATATTGAAACTGGTGATCTGAGTCACCAGAGAAGAAGGCGATGA 1257 0.5402 MKREEDHGQCSSQAINSFQSYQEQLLLQQMQHQQQNTMYPEVSPLLQPWAIPPVHSSFNPATHFPGPARPDHDPFLLPPPPPPPVPYSSFFNRRVPSLQFAYDASSSDHLRILSDALGPVVQPGSAPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEVDELMVDAADEDGKFVIKASFCCEDRSDLLPELIKTLKALRLRTLKAEITTLGGRVKNVLFITGEEDDSSATSGGSGDHQSQYCISSIQEALRAVMEKSSGGGDEITANGSVKRQRTNNLNKRIYMDRDPVRRYSEGHVLTSPPRTTGSAIAYKWHNHQHLHPPTSSPSVQWCSRFKFNHHATITVPCALHIETGDLSHQRRRR 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2646 418 PANTHER TRANSCRIPTION FACTOR BHLH30 32 335 IPR045847 GO:0003700|GO:0006355
Bisa01g2646 418 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 205 IPR036638 GO:0046983
Bisa01g2646 418 FunFam transcription factor bHLH30 144 207 - -
Bisa01g2646 418 Pfam Helix-loop-helix DNA-binding domain 152 198 IPR011598 GO:0046983
Bisa01g2646 418 Gene3D - 144 205 IPR036638 GO:0046983
Bisa01g2646 418 CDD bHLH_AtAIG1_like 144 222 - -
Bisa01g2646 418 SMART finulus 155 204 IPR011598 GO:0046983
Bisa01g2646 418 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2646 Bisa-ChrBisa01 51602916 51606198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2646 11 335 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 55.618 1.37e-107 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g2646 HLH 2.2e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2646 01 51602916 51606198 Bisa01g2646 01 51602916 51606198 ECH