Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2636 ATGGGGTTCCGCGACTACATTGAAGCATTAAAAACAGAACGCCGTAAAATCCAAGTCTTCTCCAAAGAGCTTCCTCTTTCCCTCGAGCTCGTCACGCGAGCCATTGAAGCGTGTAGGCTACAGTTGTCTGGAACGACGTCGTCGGAGCCTAATTTGAATGGGCAATTGGAGTGTTCGGGGCAGACATCATTGGACGGCCCTGTTCTGGAGGAGTTTATTCCCATAAAGAAAGGGCTATCGTCGGATTGCTGCGAGGAAGACGATGAAGACGAGCAACATTCGCATAAGCCCAAGATTGCAAGGGATAATCAAACCGATAAAAGTAAACCAGACTGGCTCAGCCTCAGATCCGTGCAGCCCTGGAATCCACAATCCCCAGTTGAAGAGGATGCTCCTAGGAAACAGTCGGTGTTGGAAGTGAAGAGACATGGGGGTGCTTTCCAGCCATTCCACAGAGAAGCAACTGTTAGCAAAACACCCTCTCCGACGCCGCTGCCGTCAGTGACTGCGGCGAATTCCACGGCGGGAGGAATCGCCAGAACCGACAAGAAAGAAGAGAAAGGACAGACACAAAGGAAGCAACGACGATGCTGGTCTCAAGAGTTGCATAAGCGCTTCTTGCACGCCCTTCAGGAGCTTGGTGGAGCAGATTCTGCAACACCGAAGCAGATAAGGGATCTAATGAAAGTCGATGGCCTCACAAATGATGAAGTGAAAAGCCATTTACAGAAATTTCGACTGCACACGAGGAGGCCAAGCTCTGTGATTCAGAACAATGGCAGTTCTCAAACGGCTCCTTTTGTACTTGTGGGGAATATTATTGTGCAGCCGCCGGATTATGCGGCGGCGGCTGCTACTTCAAAGGCTTCAGGAGAGGTGATGACACTGGCTGTGCCTCCGCCTGGGGTTTATGCGCCGGTGTCGGCACCGCACTCAGCGGTTCCGGCGAAGGCTCAGTTTGGGCAATTTGAACGTTGTTGGCATTCAAATTCAGAAGAGAGGGGAAATCACAGTGACGTGGCGGATCAGTCAAATTCACCGACTTCATCTTCCTCCACTCATATTATCACAGCTTCCCGGGCTATTCATTCGTTCTGA 1098 0.5109 MGFRDYIEALKTERRKIQVFSKELPLSLELVTRAIEACRLQLSGTTSSEPNLNGQLECSGQTSLDGPVLEEFIPIKKGLSSDCCEEDDEDEQHSHKPKIARDNQTDKSKPDWLSLRSVQPWNPQSPVEEDAPRKQSVLEVKRHGGAFQPFHREATVSKTPSPTPLPSVTAANSTAGGIARTDKKEEKGQTQRKQRRCWSQELHKRFLHALQELGGADSATPKQIRDLMKVDGLTNDEVKSHLQKFRLHTRRPSSVIQNNGSSQTAPFVLVGNIIVQPPDYAAAAATSKASGEVMTLAVPPPGVYAPVSAPHSAVPAKAQFGQFERCWHSNSEERGNHSDVADQSNSPTSSSSTHIITASRAIHSF 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2636 365 MobiDBLite consensus disorder prediction 179 196 - -
Bisa01g2636 365 FunFam Myb family transcription factor 192 250 - -
Bisa01g2636 365 SUPERFAMILY Homeodomain-like 190 251 IPR009057 -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 154 176 - -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 330 365 - -
Bisa01g2636 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 324 IPR044787 GO:0003700|GO:0006355
Bisa01g2636 365 MobiDBLite consensus disorder prediction 110 124 - -
Bisa01g2636 365 NCBIfam myb-like DNA-binding domain, SHAQKYF class 193 248 IPR006447 GO:0003677
Bisa01g2636 365 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 250 IPR017930 -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 154 196 - -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 89 109 - -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 80 134 - -
Bisa01g2636 365 Gene3D - 192 250 - -
Bisa01g2636 365 MobiDBLite consensus disorder prediction 340 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2636 Bisa-ChrBisa01 51274642 51276139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2636 5 312 G2-like Transcription Factor Family AT1G68670 45.588 6.90e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa01g2636 None None None