Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2626 ATGTACCACAAAACGCCCACGGTGGCCGGCGCCACCGTGCCGTTAGGGAACGGGCATATCGATAATTGGGGTGATTCCGGCATTGTCGACAATAGCCAACACACCGATACTTCCACAGATATTGACACCGATGATAAAAACCACTGTAATGGCGTTCAGCATGGAGGACTTGTGGTTGTGGACTCCATGGATCAACAGCCGAGGGCCAAAGTTGAAGATCAGAAGACTCTGCGTAGGCTCGCTCAGAATCGAGAGGCTGCCAGGAAGAGTCGGCTAAGGAAAAAGGCATATGTACAGCAGTTGGAGAACAGTCGACTGAGGCTGGCGCAATTAGAGCAAGAGCTCCAACGAGCACGTCAGCAGGGTATGCTTGTTGCAGCTGGATTTGTGGGGGATCATGGTCATTCAGCAGTCGGAAATGGTGCCTTAGCGTTTGACATGGACTATGCACGCTGGGTAGATGAACATCAGCAGCTCATCAGTGATCTAAGGTCGGCTGTTAATTCTCAAATGGGAGATAAGGAACTGCATCTAATTGTCGACGGTGTCATGGCACATTATGATGAAGTATTCAGGTTGAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATGCTCTCGGGTATGTGGAAGACGCCTGCAGAAAGATGTTTTATGTGGATTGGTGGATTTCGTTCATCTGAACTTCTCAAGATAGTGAGGAACCACCTCGAGCCGTTAACGGACCAGCAATTGATGGGCATCTATAATCTGCAGCAGTCTTCGTTGCAGGCCGAGGATGCCTTAACACAAGGCATGGACGCATTGCAACAATCTCTTTCGGAGACACTTTCCTCAACCTCCCTCGGGCCCACTGGTTCTGGAAACGTAGCCGATTACATGGGCCAAATGGCAATTGCTATGGGCAAGCTTGCCACATTGGAGAATTTCCTTCATCAGGCTGACCTCTTGAGGCAACAAACACTTCAACAGTTGCAAAAAATATTGACAACCCGACAAGCTGCTCGCTCCCTCCTTGTCATACATGACTACATTTCCCGGCTCCGGGCACTTGGTTCATTATGGTTAGCGCGTCCTCGCGAGTAG 1086 0.4982 MYHKTPTVAGATVPLGNGHIDNWGDSGIVDNSQHTDTSTDIDTDDKNHCNGVQHGGLVVVDSMDQQPRAKVEDQKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQRARQQGMLVAAGFVGDHGHSAVGNGALAFDMDYARWVDEHQQLISDLRSAVNSQMGDKELHLIVDGVMAHYDEVFRLKSIGAKADVFHMLSGMWKTPAERCFMWIGGFRSSELLKIVRNHLEPLTDQQLMGIYNLQQSSLQAEDALTQGMDALQQSLSETLSSTSLGPTGSGNVADYMGQMAIAMGKLATLENFLHQADLLRQQTLQQLQKILTTRQAARSLLVIHDYISRLRALGSLWLARPRE 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2626 361 Pfam bZIP transcription factor 75 113 IPR004827 GO:0003700|GO:0006355
Bisa01g2626 361 SUPERFAMILY Leucine zipper domain 75 118 IPR046347 GO:0003700|GO:0006355
Bisa01g2626 361 CDD bZIP_HBP1b-like 75 122 - -
Bisa01g2626 361 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 78 93 IPR004827 GO:0003700|GO:0006355
Bisa01g2626 361 Gene3D - 75 122 - -
Bisa01g2626 361 PANTHER TRANSCRIPTION FACTOR TGA9 30 361 - -
Bisa01g2626 361 FunFam BZIP family transcription factor 74 123 - -
Bisa01g2626 361 SMART brlzneu 71 124 IPR004827 GO:0003700|GO:0006355
Bisa01g2626 361 Coils Coil 94 121 - -
Bisa01g2626 361 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 73 117 IPR004827 GO:0003700|GO:0006355
Bisa01g2626 361 Pfam Seed dormancy control 160 234 IPR025422 GO:0006351|GO:0043565
Bisa01g2626 361 ProSiteProfiles DOG1 domain profile. 142 358 IPR025422 GO:0006351|GO:0043565
Bisa01g2626 361 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2626 Bisa-ChrBisa01 51068139 51070650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2626 1 361 bZIP Transcription Factor Family AT1G68640 70.248 1.24e-163 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa01g2626 DOG1 1.6e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2626 01 51068139 51070650 Bisa01g2626 01 51068139 51070650 ECH