Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2600 ATGACTTCAACTAAGAACCTGGCCAACGCCGTCGGCGGCAAGACCGCCAGAGCCTGCGATAGCTGCATTAGGAAGCGTGCGCGTTGGTACTGTGCTGCCGACGATGCTTTCCTCTGTCAAACATGTGACTCTGCCGTCCACTCCGCCAACCCTTTGGCTCATCGACACGAACGGCTCCGATTGAAATCCTCGTCCTACAAGTCCTCTACCACCTCCTCCGACGTCGTCGTTTCGGCCGCCGTGGATCTCACTCTCGCTCCTTCCTGGCTCCGAGGGTTCACCAAGAAGGCTCGAACCCCTCGACATGGCAAATACCACTCTTCCAGTTCCTCCACCTCCCATCGAACGCCCAGAGGACACAAGCACCCGACCAGGAACCCGTTTCATCTGGTTCCGGAGGTGGGTTCCGATGAGTACTCGAATTCCCATGAGGAGAACGAAGAGCAGCTTCTTTATCGGGTGCCCATCTTCGACCCGTTTGTCGCTGAGCAGTGTACTCCTCCGTCCTCTGTAACTTCGGCTGAAGCAGCAGCCGTGGCGGGTTCTAGCGAGATGGACAATAAGCAGACTAAGCCGACCGAAGGCAAAGCTTCATTGGGGAATAACAGTAATGGTATGGAAAACTTACATGGGTTTCTTCCGTCTGAAATGGAGCTCGCGCAGTTTGCAGCTGATGTTGAGAGCTTGTTAGGCAGGGGACTAGATAATGAGTGTATAGGCATGGAGGAGTTGGGGCTAATTGATAATAAAGAAGAGGAATCGAGGGAGTGTTCTGTGGGCAGCGAGAAAGTAGTGAAGGTGGAGGACGAAGATCAGAGCCCTGATTGCAAGCTTGAGACAGATCAGATGGAGATGGGAATCAGAGAACCGTTTGAACTGAACTTTGATTATGACTCTCCCGCGACCTGTGAAGAAGCAGAGGAGGAGGAGAAGGTCGGACTGGACATAACCAAAGAGATGAAGAACGATGAAGGAGAATTCATCAAAGGGAACAGTAACAATAATAATAATAATAATAATAATCAGAGAAAGAGGAAGACATTGCTGCAGCTCGATTATGAAGCAGTAATTTCTGCCTGGGCTTGCCAGAAATCTCCATGGACAACTGGTGACAAACCTGACTTCGACCCAGATGAGTGCTGGCCTGATTGCATGGGGACATGTGGAATGGAGTTACATCAACCGTATTACGGTGAAATGGGCGGGTATGGGTGCCACACGGCGATGGGGGACGGAGGGAGAGAGGCTAGGGTGTCGAGGTACAGAGAGAAGAGGAGGACGAGGTTGTTCTCGAAGAAAATAAGGTACGAGGTTCGGAAATTGAATGCGGAGAAGAGACCCAGAATGAAAGGGAGGTTTGTGAAGAGAGCATCCTTTGCTGCAGCACCACCTGCTTTTCCTTTGCTCTCCAAATAA 1416 0.5127 MTSTKNLANAVGGKTARACDSCIRKRARWYCAADDAFLCQTCDSAVHSANPLAHRHERLRLKSSSYKSSTTSSDVVVSAAVDLTLAPSWLRGFTKKARTPRHGKYHSSSSSTSHRTPRGHKHPTRNPFHLVPEVGSDEYSNSHEENEEQLLYRVPIFDPFVAEQCTPPSSVTSAEAAAVAGSSEMDNKQTKPTEGKASLGNNSNGMENLHGFLPSEMELAQFAADVESLLGRGLDNECIGMEELGLIDNKEEESRECSVGSEKVVKVEDEDQSPDCKLETDQMEMGIREPFELNFDYDSPATCEEAEEEEKVGLDITKEMKNDEGEFIKGNSNNNNNNNNNQRKRKTLLQLDYEAVISAWACQKSPWTTGDKPDFDPDECWPDCMGTCGMELHQPYYGEMGGYGCHTAMGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFAAAPPAFPLLSK 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2600 471 SMART bboxneu5 14 61 IPR000315 GO:0008270
Bisa01g2600 471 Pfam B-box zinc finger 16 58 IPR000315 GO:0008270
Bisa01g2600 471 Pfam CCT motif 414 456 IPR010402 GO:0005515
Bisa01g2600 471 MobiDBLite consensus disorder prediction 96 145 - -
Bisa01g2600 471 MobiDBLite consensus disorder prediction 172 203 - -
Bisa01g2600 471 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Bisa01g2600 471 ProSiteProfiles CCT domain profile. 414 456 IPR010402 GO:0005515
Bisa01g2600 471 CDD Bbox1_BBX-like 18 61 - -
Bisa01g2600 471 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2600 Bisa-ChrBisa01 50550288 50551808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2600 5 456 C2C2-CO-like Transcription Factor Family AT1G25440 44.227 2.55e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bisa01g2600 CCT 1.6e-17 CL0281