Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2585 ATGAGCAAGGTGGAGAATCACACCTTCACCAATCAAGGATTAATCATGCCTTTCTCCATTGAAAAACTTCAGGATCAACAGCTTCATTTCCCTCTGGTTCAGTCATCACAAAGCTCAGGGGAAGATTCTTCATCTCCATGTTCTGCAAATTTTCCAGAACATAATAAGAAAGTGGCTGGATACAAAAGGAAGAGAAACAACGACAGGTTTGAAGAGAATCCAAAAGAAGTAATCCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATAGCCACAGTTTAGCAGAAAGGGTGAGAAGAGAGAAAATCAATGAGAAGCTGAGATGCTTGCAGGACTTGGTTCCAGGGTGCTATAAGGCAATGGGAATGGCAGTTATGTTAGATGTGATTATAAACTATGTTCTGTCACTGCAACAACAGATTGAGTTTCTTTCCATGAAGCTTTCAGCAGCAAGTGTGTATTTTGATTTCAATGCCTGTAGCATGGATGCCACTGAACCCCTGCAGAGAATTACAGGCATAGATGGAATCCAAGAGATGGAAAGGATGGGAGGAGAAGGTTATGGAGGGTTTCCTTATTTCAATCCTACGTGGCCACTTCAATAA 603 0.4196 MSKVENHTFTNQGLIMPFSIEKLQDQQLHFPLVQSSQSSGEDSSSPCSANFPEHNKKVAGYKRKRNNDRFEENPKEVIHVRAKRGQATDSHSLAERVRREKINEKLRCLQDLVPGCYKAMGMAVMLDVIINYVLSLQQQIEFLSMKLSAASVYFDFNACSMDATEPLQRITGIDGIQEMERMGGEGYGGFPYFNPTWPLQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2585 200 MobiDBLite consensus disorder prediction 34 74 - -
Bisa01g2585 200 Pfam Helix-loop-helix DNA-binding domain 90 114 IPR011598 GO:0046983
Bisa01g2585 200 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 136 IPR011598 GO:0046983
Bisa01g2585 200 MobiDBLite consensus disorder prediction 34 51 - -
Bisa01g2585 200 CDD bHLH_AtBPE_like 76 157 - -
Bisa01g2585 200 SMART finulus 92 142 IPR011598 GO:0046983
Bisa01g2585 200 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 84 153 IPR036638 GO:0046983
Bisa01g2585 200 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 40 161 IPR024097 GO:0006355
Bisa01g2585 200 Gene3D - 86 148 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2585 Bisa-ChrBisa01 49888251 49889442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2585 72 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 66.667 5.83e-53 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g2585 HLH 5.6e-05 No_clan