Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2584 ATGTCTGGAGTTACAAAGAGAGATCAGAAGTCGGGTTCTAACGAAGAAGAGACTACTGAGCTGAGAAGAGGCCCTTGGACTCTCGAAGAAGACAGCCTCCTCATCCACTATATCGCCCGTCACGGCGAAGGTCGTTGGAATATGTTGGCCAAAAGTGCTGGATTGAAGAGGAACGGAAAGAGCTGCAGACTCAGATGGCTCAATTACTTGAAACCGGATATCAAGCGAGGGAACCTCACCCCACAAGAACAGCTCTTGATCCTCGAACTCCATTCCAGATGGGGTAACAGGTGGTCGAAAATTGCTCAGCATCTTCCAGGAAGAACAGACAATGAGATCAAGAACTACTGGAGAACTAGGGTGCAGAAACAGGCACGCCAGCTCAACATCGAGTCTGGAAGCAAGAAATTCATGGACGCAGTTCGCTGTTTCTGGATGCCAAGGCTGATTCAGAAGGTGGAACAGAAACAGGATGACTCTTCTCTAACAAGCACCAACCTTCAAGTTCCTTCGGAGCCTCCAAACCACTCTGCTTTTCCTTCTCTGTCTCCAGCTCCATCACCTCTTCAACCTCAAGACCATTACATTCCCAGCAATTTTCCCTCTGATTCCCTGCAATTCTCGCAGCCACTTGAGCTCTCATCAGAGATTCCATCAACTTCTCACAGTCCCACTCCCACCTGTTGGTTTGACCAGAACAGTGTTGATTATTACAGCAATCTGGTTCAGGACGGGTGGTGTGGGAATTATAGCAGCAATGGCTATGGGTTAATGGAAGGGGTGAACCAGGAAGCAATGTCAGGGATCGAGAGTTACGACGTTTCGCAGTTTGATTATTATCAGAATGCAGAGAATGATCAGTGGGTGTTTGGAAACATGGGAGATTCTTTATGGAACATGGATTCTATGTGA 912 0.4759 MSGVTKRDQKSGSNEEETTELRRGPWTLEEDSLLIHYIARHGEGRWNMLAKSAGLKRNGKSCRLRWLNYLKPDIKRGNLTPQEQLLILELHSRWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKKFMDAVRCFWMPRLIQKVEQKQDDSSLTSTNLQVPSEPPNHSAFPSLSPAPSPLQPQDHYIPSNFPSDSLQFSQPLELSSEIPSTSHSPTPTCWFDQNSVDYYSNLVQDGWCGNYSSNGYGLMEGVNQEAMSGIESYDVSQFDYYQNAENDQWVFGNMGDSLWNMDSM 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2584 303 SMART sant 75 123 IPR001005 -
Bisa01g2584 303 SMART sant 22 72 IPR001005 -
Bisa01g2584 303 MobiDBLite consensus disorder prediction 9 23 - -
Bisa01g2584 303 MobiDBLite consensus disorder prediction 156 176 - -
Bisa01g2584 303 SUPERFAMILY Homeodomain-like 21 117 IPR009057 -
Bisa01g2584 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 70 IPR017930 -
Bisa01g2584 303 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 18 191 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bisa01g2584 303 MobiDBLite consensus disorder prediction 177 191 - -
Bisa01g2584 303 ProSiteProfiles Myb-like domain profile. 18 70 IPR001005 -
Bisa01g2584 303 Gene3D - 23 75 - -
Bisa01g2584 303 ProSiteProfiles Myb-like domain profile. 71 121 IPR001005 -
Bisa01g2584 303 MobiDBLite consensus disorder prediction 156 201 - -
Bisa01g2584 303 FunFam Myb transcription factor 23 75 - -
Bisa01g2584 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 125 IPR017930 -
Bisa01g2584 303 Pfam Myb-like DNA-binding domain 76 119 IPR001005 -
Bisa01g2584 303 Pfam Myb-like DNA-binding domain 23 70 IPR001005 -
Bisa01g2584 303 FunFam MYB transcription factor 80 143 - -
Bisa01g2584 303 CDD SANT 80 119 IPR001005 -
Bisa01g2584 303 MobiDBLite consensus disorder prediction 1 23 - -
Bisa01g2584 303 Gene3D - 79 121 - -
Bisa01g2584 303 CDD SANT 25 70 IPR001005 -
Bisa01g2584 303 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 38 47 IPR001345 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2584 Bisa-ChrBisa01 49833830 49835015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2584 20 303 MYB Transcription Factor Family AT1G68320 50.685 6.68e-85 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g2584 Myb_DNA-binding 5e-14 CL0123