Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2575 ATGGGGACGAGCTCCAAGATGGATGGACCTTCTGCCCCATCAATTCGACGAGACCCCTATGAGGTATTGTCCGTGTCAAGGGAAGCAAATGATCAGGAAATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCAGACAAAAATGCCAACAATCCTGAAGCTTCAGAATTATTTAAAGAGGTTGCATTTTCGTACAATATCTTATCTGATCCAGAGAAGAGGAGGCAGTATGACAGTGCAGGTTTTGAGGCACTTGATGCTGATAACTTGGACATGGAGATTGATTTATCAAATCTTGGAACTGTCAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACAATTTCAGCTAATGTTCTTGAAGAAGCCTTGAATGGCACAGTTACCGTCAGACCCCTTCCTATTGGAACGGCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGATCAGCAAGCTGAGTCAGGGATTGTAGTAAGAGTTACTTCAACTGCACAGAGCAAATTCAAGTTGCTCTACTTCGAACATGATGCAAATGGTGGCTATGGCTTGGCTTTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGCATGTATTTCTTACATTTTCAAGTATATAGAATGGATTCAACTGTGAATGCGTTAGCGATGGCCAAAGATCCTGAAGCTGCCTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAACTAAAGCCTGGCAGTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTACCTATACAATTGAGGCACTTTGTGTAAAATCTTATGAGGATACCACCCAAAAGCTTAAAGACATTGAAGCTCAAATTCTAAGAAAGAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTACCAAGAAGTGACTGAAAGATACACCCAAGAAAAACAGTCAGTGGATGAACTTCTGAAGCAAAGAGACAATATCCATTCTACCTTCACCGTTGCTAAGTCAAACTCTGTTAGTGGGAGTGCTAGTAATTTAAGTAACGGAAGTTCTAGCAAAATTGCCGGTGAAGATTCCAAAGCAGAGAACCCTGGGGAAGATGGAGGCTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTTAAGGGTTCTGATAAGAGAATTTAA 1242 0.4138 MGTSSKMDGPSAPSIRRDPYEVLSVSREANDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAFSYNILSDPEKRRQYDSAGFEALDADNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTAVSGKVEKQCAHFFGVTINDQQAESGIVVRVTSTAQSKFKLLYFEHDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGSHIFAVYGDNFFKTATYTIEALCVKSYEDTTQKLKDIEAQILRKRNDLRQFESEYRKALARYQEVTERYTQEKQSVDELLKQRDNIHSTFTVAKSNSVSGSASNLSNGSSSKIAGEDSKAENPGEDGGSDGKDKSGKKKWFNLNLKGSDKRI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2575 413 Gene3D DnaJ domain 6 99 IPR036869 -
Bisa01g2575 413 CDD DnaJ 18 72 IPR001623 -
Bisa01g2575 413 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Bisa01g2575 413 MobiDBLite consensus disorder prediction 358 413 - -
Bisa01g2575 413 Coils Coil 288 343 - -
Bisa01g2575 413 SMART dnaj_3 17 75 IPR001623 -
Bisa01g2575 413 Pfam DnaJ domain 18 80 IPR001623 -
Bisa01g2575 413 SUPERFAMILY Chaperone J-domain 17 87 IPR036869 -
Bisa01g2575 413 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Bisa01g2575 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 3 412 - -
Bisa01g2575 413 FunFam Chaperone protein dnaJ 16 2 100 - -
Bisa01g2575 413 MobiDBLite consensus disorder prediction 358 377 - -
Bisa01g2575 413 MobiDBLite consensus disorder prediction 1 23 - -
Bisa01g2575 413 PRINTS DnaJ domain signature 55 75 IPR001623 -
Bisa01g2575 413 PRINTS DnaJ domain signature 38 53 IPR001623 -
Bisa01g2575 413 PRINTS DnaJ domain signature 20 38 IPR001623 -
Bisa01g2575 413 PRINTS DnaJ domain signature 75 94 IPR001623 -
Bisa01g2575 413 MobiDBLite consensus disorder prediction 379 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2575 Bisa-ChrBisa01 49579377 49595313 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2575 11 91 C2H2 Transcription Factor Family AT1G74250 41.860 1.50e-12 67.4