Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2571 ATGGCGGTATCCTCTTACTTCTTTCTCCTTGTGAGCTTTTTCTCCTTAGCTCTTCATTTGCTTCTACTCGCTGAAGCATCCAAACACCCAGATTTAGATTCTCTCATGGCGTTCAAAGCCGCTTCTGATACGCACAACAGGCTCACATCTTGGAACTCCAGCACCGACCCTTGTGCTTGGGACTCTGTCTCTTGCTTCAAAAACCGAGTATCGCGACTCGTTCTGGACAATCTCGATCTTCGCGGCTCTATCGAACCGTTAACTTCTCTGACTGAACTTCGAGTTCTGAGCCTGAAGCGTAATCGGTTTACCGGCTCTGTTCCGAGTCTGTCGAATTTCACGGCCCTGAAGCTTCTCTTTCTGTCTCACAATGAGTTTTCCGGCGCTTTTCCGTCGACGGTTACTTCGCTTCTCCGCTTGTACCGTCTTGATCTGTCTCACAACAACTTCTGCGGGAGTATTCCGGCAACGGTTAACAGTCTGACCCACCTTGTCACTCTCCGTCTTGACGAGAACAGGTTCTCCGGCCGCATTCCCGTTCTGAATCTTCCTTACCTACAAGACTTCAATGTCTCCGGTAACCGCCTTACCGGCGAAATACCCAAATCGTTGTCGGGTATCCCTGAATCCGCGTTCGCTCAAAACCCGTCTCTATGCGGAGATCCACTGCTGAAATGTAAGGATACTCACTTGGTCCCGAGCAAACCGGGTTCTGAGGGAGCCATTGCTTCACCATTGATGCCGCGAAACAATGCTCCGACACCACCCGGAGCATCCTCACGCCACAACGGAACTCCGAAAATGAGTAGAACAACTCTAATCGCCATCATACTCGGCGACATTTTGATTCTCGCGGTAGTGTCCCTTCTTCTCTACTGCTATTTCTGGCGAACCTACTCCGCGAAATTGAAAGCGCAAAAAGGGTCGAAGCTTCAGGAAAGCGAGAAGATCGTGTATTCATCGAGCGCATACCCGTCGTCCCAACCCGGATTCGAGAGGGGTCAGATGGTGTTCTTCGAAGGGGTGAAGAGGTTCGAGCTAGAGGACTTGCTTCGAGCTTCTGCTGAAATGCTGGGAAAAGGTGGGTTCGGGACGGCGTACAAAGCTGCCCTCGACGACGGCAATGTCGTGGCCGTGAAGAGGCTCAAGGACGCTCAGATTAACGGGAAGAGAGAGTTCGAGCAGCACATGGAAGTTCTGGGAAGGCTGAGGCATCCCAATATCGTGAGCTTGAGAGCATACTATTTTGCGCGAGAGGAGAAGTTGCTGGTCTATGATTACATGCCCAATGGTAGCTTGTTCTGGCTCCTTCATGGGAACCGAGGACCCGGGCGAACCCCTCTGGACTGGACCACAAGGCTCAAAATAGCAGCAGGAATCGCAAGAGGGGTAGACTTCATTCACAGATCATGCAAGACCCTTAAACTCACCCACGGTAACATCAAATCCTCCAACATCCTCATCGACAAGGACGGAAATGCACGTGTCTCGGACTTCGGGCTCTCCATCTTCGCAACCCCTTCCCCGTCGTCAGCTCCCAGATCCAACGGTTACCGTGCTCCGGAGGCATCGGACGGTCGGAAACTCACCCAGAGATCCGACATGTACTCCTTTGGCGTCCTCCTCCTGGAACTTCTCACCGGGAAGTACCCCTCCGTCGTGGACGGCGGTGGGGCCGGAGGTGTATTCGCCGGTGGAGTCGTGGACCTACCGAGGTGGGTCCATTCGGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTTGATATTGAGCTGATGAGGTACAAGGACATTGAAGAGGAAATGGTGGGGCTGCTTCAGATTGCTATGTCTTGTACTGCGGCCGCACCTGATCAACGTCCCAGAATGAGCCACGTGGTTAAGATGATTGAGAATATACGTGGGGCCGAGTTGTCGCCGTGTCATGACACATTGGACTCGGTGTCTGACTCACCGTCCTTGTCTGAAGACGCATGCGGAGTTAGCTAG 1986 0.5282 MAVSSYFFLLVSFFSLALHLLLLAEASKHPDLDSLMAFKAASDTHNRLTSWNSSTDPCAWDSVSCFKNRVSRLVLDNLDLRGSIEPLTSLTELRVLSLKRNRFTGSVPSLSNFTALKLLFLSHNEFSGAFPSTVTSLLRLYRLDLSHNNFCGSIPATVNSLTHLVTLRLDENRFSGRIPVLNLPYLQDFNVSGNRLTGEIPKSLSGIPESAFAQNPSLCGDPLLKCKDTHLVPSKPGSEGAIASPLMPRNNAPTPPGASSRHNGTPKMSRTTLIAIILGDILILAVVSLLLYCYFWRTYSAKLKAQKGSKLQESEKIVYSSSAYPSSQPGFERGQMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAALDDGNVVAVKRLKDAQINGKREFEQHMEVLGRLRHPNIVSLRAYYFAREEKLLVYDYMPNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGIARGVDFIHRSCKTLKLTHGNIKSSNILIDKDGNARVSDFGLSIFATPSPSSAPRSNGYRAPEASDGRKLTQRSDMYSFGVLLLELLTGKYPSVVDGGGAGGVFAGGVVDLPRWVHSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMSCTAAAPDQRPRMSHVVKMIENIRGAELSPCHDTLDSVSDSPSLSEDACGVS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2571 661 Gene3D Ribonuclease Inhibitor 115 226 IPR032675 -
Bisa01g2571 661 CDD STKc_IRAK 358 632 - -
Bisa01g2571 661 Gene3D Phosphorylase Kinase; domain 1 328 427 - -
Bisa01g2571 661 MobiDBLite consensus disorder prediction 237 266 - -
Bisa01g2571 661 FunFam Nuclear pore complex protein NUP107 28 180 - -
Bisa01g2571 661 Pfam Leucine rich repeat N-terminal domain 30 65 IPR013210 -
Bisa01g2571 661 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 633 IPR046959 -
Bisa01g2571 661 FunFam pollen receptor-like kinase 1 323 427 - -
Bisa01g2571 661 Gene3D Ribonuclease Inhibitor 23 114 IPR032675 -
Bisa01g2571 661 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 428 639 - -
Bisa01g2571 661 SUPERFAMILY L domain-like 49 207 - -
Bisa01g2571 661 ProSiteProfiles Protein kinase domain profile. 352 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2571 661 SUPERFAMILY Protein kinase-like (PK-like) 356 629 IPR011009 -
Bisa01g2571 661 MobiDBLite consensus disorder prediction 507 528 - -
Bisa01g2571 661 ProSitePatterns Protein kinases ATP-binding region signature. 358 380 IPR017441 GO:0005524
Bisa01g2571 661 Pfam Protein kinase domain 356 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2571 661 Gene3D Transferase(Phosphotransferase) domain 1 428 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2571 Bisa-ChrBisa01 49494294 49497393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2571 31 659 Receptor kinase-like Gene Family AT1G68400 66.925 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa01g2571 Pkinase 1.1e-37 CL0016