Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2570 ATGGCCTCTAGTGAAGGGAGGCGGCGTCATCATGATCTTATGCCTCTTGCTGCATTGTTAAGCAAAGAGATGAAGATCGAGAAGATGGAGAAGCCGACTGTGAGATATGGACAAGCTGCCCAGTCTAAGAAAGGGGAGGACTACTTTCTAATCAAGACTGATTGTCAGCGAGTATCTGGGAACCCCTCATCAGCATTTTCTGTATTCGCGATCTTTGATGGACACAATGGAAATGCTGCAGCCATTTTCAGTAGGGAGCATTTGTTAAATCATGTGTTGAGCGCTATCCCTCGAGGCCTTGGACGGGATGAGTGGCTTCAAGCTTTACCTCGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAATTCCAGAGCAGAGGAGAAACTTCTGGAACCACAGCCACTTTTGTGATAGTTGATAGATGGACTGTGACAGTTGCATCTGTTGGTGATTCCCGTTGTATATTAGACACCCAGGGTGGAGCTGTTACAAATTTAACCGTTGATCACCGGCTTGAAGAGAATACTGAAGAGAGGGAACGTGTTACAGCCAGCGGTGGTGAAGTTGGGAGGCTGAGCATTGTTGGTGGTGCAGAGATTGGTCCCCTCCGTTGTTGGCCAGGGGGTTTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTCATAGTTCCTGTACCTTATGTCAAACAAGTGAAGCTATCAAATGCTGGCGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTTTATCCTCAGACATGGCTGCAAAATCTTCTAGAGGTTTACCTGCTGAACTTGCAGCTAGGCAGGTTGTGAAGGAAGCATTAAGAACAAGAGGGTTGAAGGATGACACGACTTGTATAGTAGTTGACATAATTCCACCTGATAATGCATCGCCTCAGACTCCTCCTCCCAAAAAGCAGAACAAGTTGAGAGCTCTACTTTTCAGGAAGAAGTCTCGTGATGCAGGCAAGCTATCAAAGAAGCTTTCAGCTATAAATATAGTGGAGGAACTGTTTGAAGAAGGATCAGCTATGCTTGCTGAAAGACTGGGAAGTGATGACAACACCGGGCAATCGACATCTGGCCTCTTCATCTGCGCCGTGTGCCAAGTTGATCTTGCTCCAAGTGAGGGAATCTCCGTTCATGCTGGTTCCATTTTCTCCACCAGCTCCAAGCCCTGGCAGGGTCCTTTCCTATGTGCCGATTGTCGCGACAAGAAAGACGCCATGGAAGGGAAACGTCCCAGCGGGGTTAAAGTGTCGTAG 1284 0.4782 MASSEGRRRHHDLMPLAALLSKEMKIEKMEKPTVRYGQAAQSKKGEDYFLIKTDCQRVSGNPSSAFSVFAIFDGHNGNAAAIFSREHLLNHVLSAIPRGLGRDEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDTQGGAVTNLTVDHRLEENTEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPVPYVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSSRGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNASPQTPPPKKQNKLRALLFRKKSRDAGKLSKKLSAINIVEELFEEGSAMLAERLGSDDNTGQSTSGLFICAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRDKKDAMEGKRPSGVKVS 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2570 427 Gene3D - 34 302 IPR036457 -
Bisa01g2570 427 SMART PP2C_SIG_2 46 297 IPR001932 -
Bisa01g2570 427 Pfam Protein phosphatase 2C 61 281 IPR001932 -
Bisa01g2570 427 SMART PP2C_4 25 295 IPR001932 -
Bisa01g2570 427 FunFam probable protein phosphatase 2C 5 35 302 - -
Bisa01g2570 427 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Bisa01g2570 427 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Bisa01g2570 427 SUPERFAMILY PP2C-like 41 297 IPR036457 -
Bisa01g2570 427 CDD PP2Cc 43 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2570 Bisa-ChrBisa01 49483321 49486858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2570 1 426 PP2C-type Phosphatase Gene Family AT1G68410 80.000 0.0 707