Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2569 ATGTGTAGCAATGGCCAATCTCCGGGTGGCGGTCACAACGTCAGAGACTTAATCTGCAATGCTGGTGCTGGTGCCGCAGCTGGGGCAATAGCAGCTACATTTGTGTGCCCATTGGATGTGATCAAGACAAGATTACAAGTTCATGGTCTTCCCCCTGGGCAGAAAGGTAGTGTTATTATCACGAGCTTGCAGAATATAGTAAGGACTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCGACAATACTAGCGTTGCTTCCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAATTAAAAGGCCTGCTTCGTTCACATGATGGTTGCAACCAACTCACAACTGGTGAAAATATGATAGCTGCTGCTGGTGCTGGGGTGGCCACGGCAATTTCCACAAATCCATTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCCTGATGTTGTACCTTACAAAAGTGTTCTTTCTGCTTTGACAAGGATTACCCATGAGGAAGGCATGAGAGGATTATATAGTGGCATTGTGCCGTCATTGGCTGGCATAAGTCATGTTGCAATACAATTCCCAGCATACGAAAAGATCAAGTCATACATGGCCAAGAAGGAAAACACAACTGTTGACAAGCTACGTCCTGGAAATGTTGCCATTGCATCTTCAATTGCCAAAGTAATTGCCTCTGTAATGACTTATCCTCATGAGGTGATACGCTCCAGGCTGCAGGAGCAAGGACAGGCAAAAAATACCAAAGCCCGATATGCAGGGGTTGTTGATTGCACTAGAAAGGTGTTCCAAAAGGAAGGCCTTCCCGGCTTTTATCGTGGTTGTGCAACCAATCTATTAAGAACAACTCCATCAGCTGTCATTACATTCACCAGTTATGAGATGATATACAGGTTCTTCCATCGTGTTGTACCTCAGGACAAAGGGTATCCACAAAGCTATCCTAAATCCAATGACCTCAACAAACCCCAGCCAGAAAACAGTGACATCAAATTAAAAGATGGACCTGTGTTATGA 1029 0.4519 MCSNGQSPGGGHNVRDLICNAGAGAAAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIITSLQNIVRTEGFRGMYRGLSPTILALLPNWAVYFTVYEQLKGLLRSHDGCNQLTTGENMIAAAGAGVATAISTNPLWVVKTRLQTQGMRPDVVPYKSVLSALTRITHEEGMRGLYSGIVPSLAGISHVAIQFPAYEKIKSYMAKKENTTVDKLRPGNVAIASSIAKVIASVMTYPHEVIRSRLQEQGQAKNTKARYAGVVDCTRKVFQKEGLPGFYRGCATNLLRTTPSAVITFTSYEMIYRFFHRVVPQDKGYPQSYPKSNDLNKPQPENSDIKLKDGPVL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2569 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Bisa01g2569 342 MobiDBLite consensus disorder prediction 315 329 - -
Bisa01g2569 342 MobiDBLite consensus disorder prediction 314 342 - -
Bisa01g2569 342 Gene3D Mitochondrial carrier domain 17 304 IPR023395 -
Bisa01g2569 342 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Bisa01g2569 342 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Bisa01g2569 342 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Bisa01g2569 342 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Bisa01g2569 342 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Bisa01g2569 342 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Bisa01g2569 342 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 309 IPR044712 GO:0006862|GO:0055085
Bisa01g2569 342 Pfam Mitochondrial carrier protein 214 305 IPR018108 -
Bisa01g2569 342 Pfam Mitochondrial carrier protein 20 106 IPR018108 -
Bisa01g2569 342 Pfam Mitochondrial carrier protein 113 205 IPR018108 -
Bisa01g2569 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Bisa01g2569 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Bisa01g2569 342 SUPERFAMILY Mitochondrial carrier 14 299 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2569 Bisa-ChrBisa01 49427051 49431403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2569 1 338 Chloroplast and Mitochondria Gene Families AT1G25380 66.282 1.31e-153 434