Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2559 ATGAACCAAACCACCCTCTCCTCGTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCACAATCGCCTTGTCTTCATCTATCAATCCAAAGTTCCAAGCTTGTCAGCCTGCAACCTGCGGCAACCTCACCGGCATAACCTACCCTTTCTACATCCAAAACCGACAGCAATCCTTTTGCGGTTACCCCGGTTTCGGCATCTCCTGCTCCGACAATGGCCTTCCGATCCTCAATCTCTTCGGAACAAACTACACCATCCACGAAATTTCATACCCCAACCAGTCAATTCGAGTCTCCGACTCCGCCTTCTCTGTCTCAACCCCAAAACGGACATCCTGCGGGATTCCTAGTCCCCACAATCTGACCCTCCAAGGAAGCAGATTCCAGTTCGGTCCGAACCAGAAGGACCTGTTCTTGGTGTTCGGGTGCGACCTGGGGTCGCTGCCGGTGGGGTGGTCGAAGTACAGAGTGGGGTGCTCTGTGGAGAACGGAACGGACTCTGTTTTGGCGATGGCAGGGGAGGGTCGGGATTTGATGGAGGCAGCGGAGAAGTGTGGGGGAGGGGTGGTGAGGACGAAGGTTGAAGAGAAAGGAAGGAGGATTGAAGAGGAACTGAGAAGAGGGTTTGTGTTGAATTGGATTGTGTCAGATTGTAGTGCGTGCAAGATGACGGGAGGGAAATGTGGGTTCGATGCGAATCCTGAGGTTTACAGTTTCAGATGCTATTGTCCTGATAGAGATCATGCTCGCAAATGCGATCCTGATGGTAAGAGTAGGGCTTTGGAGCTGGGACTTGGACTTGGACTAGGTTTAGGTATTGGGCTTCCAGCAATTATGATAATTGGGTGGCTCATTGGAAGGCATTACAAACTAAGATACAGTGGTGCTGATGATGACCAGTTCCAATCAAGAGACATTTATTTTGATACCTTCTCAAATCCAGACCCAGAAAATGGCACTGTCTACTTAGGCGTCCCTCTCTTCTCTTATAAGGAGCTTCAAGATGCAACCAACAACTTCGACCATGCAAGAACACTTGGAGATGGAGGCTTTGGAATTGTTTACTATGGAAAACTTAAAGATGGCCGAGAAGTTGCTGTGAAGCATCTGTACGAGCACAACTACCGACGAGCAGAACAGTTCAGAAATGAAGTCAAGATTCTCACAGGATTGCGCCACAAAAACCTTGTGTCCCTCTATGGTTGCACTTCATGCCAGAGCCGAAAACTCCTCCTGGTTTATGAATATATCTCAAACGGCACTGTAGCTTGTCACCTCCATGGTGACTCATCAAAACTTCCACCACTATCATGGCCTATACGCATCAAAATTGCCATAGAAACTGCAAGTGCATTGGCTTACCTACACGCCAAGGACATTATTCACCGTGATGTCAAAACTACCAACATTCTCTTGGACAATAATTTTAATGTCAAAGTTGCAGACTTTGGACTTTCTAGATTGTTCCCCAATGATGTGACCCATGTTTCCACGGCTCCACAAGGAACACCAGGGTACGTTGATCCAGAGTACTACCAATGCTACAAGCTCACAAGCAAGAGTGATGTGTATAGCTTTGGAGTTGTGCTTATGGAACTAATATCATCTAAACCAGCGGTTGATATTAGTAGAAGTAAGGATGAGGTGAACTTGTCGAGTTTAGCGGTGAAGAAGATTCAAGAGAGTGCATTTAGTGAGATAGTGGATCCTTGTTTAGGGATAGAGAAGGATAGTGAGGTGAAGAGGATGGTGGTTTCGGTCGGGGAATTGGCTTTTCAGTGTTTGAAGAGAGACAAGGAGTCGAGGCCTTCCATGAATGAGGTTTTGGAAGTTTTGAAGAGGATAGAGAGTGGGAAAGGTGAGGTTGAAGGTGTGGATGACATGAATAGTGATAATGTGACTTCGTTACCACCACCTATGTCACCATCACCACCATCACCACCATCACCTATGTCACTGGATAGGGAAGAAGTTGGTTTGTTGAGGAAGGTGAATCTACCTCCTGCTTCACCAAATACTGTGACTGATGAATGGAAAAGTGAATCTACCACCCCTAATGTCAGTACTTGA 2067 0.4678 MNQTTLSSFFFFFFFFFFSTIALSSSINPKFQACQPATCGNLTGITYPFYIQNRQQSFCGYPGFGISCSDNGLPILNLFGTNYTIHEISYPNQSIRVSDSAFSVSTPKRTSCGIPSPHNLTLQGSRFQFGPNQKDLFLVFGCDLGSLPVGWSKYRVGCSVENGTDSVLAMAGEGRDLMEAAEKCGGGVVRTKVEEKGRRIEEELRRGFVLNWIVSDCSACKMTGGKCGFDANPEVYSFRCYCPDRDHARKCDPDGKSRALELGLGLGLGLGIGLPAIMIIGWLIGRHYKLRYSGADDDQFQSRDIYFDTFSNPDPENGTVYLGVPLFSYKELQDATNNFDHARTLGDGGFGIVYYGKLKDGREVAVKHLYEHNYRRAEQFRNEVKILTGLRHKNLVSLYGCTSCQSRKLLLVYEYISNGTVACHLHGDSSKLPPLSWPIRIKIAIETASALAYLHAKDIIHRDVKTTNILLDNNFNVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYKLTSKSDVYSFGVVLMELISSKPAVDISRSKDEVNLSSLAVKKIQESAFSEIVDPCLGIEKDSEVKRMVVSVGELAFQCLKRDKESRPSMNEVLEVLKRIESGKGEVEGVDDMNSDNVTSLPPPMSPSPPSPPSPMSLDREEVGLLRKVNLPPASPNTVTDEWKSESTTPNVST 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2559 688 MobiDBLite consensus disorder prediction 618 688 - -
Bisa01g2559 688 Gene3D Transferase(Phosphotransferase) domain 1 416 623 - -
Bisa01g2559 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Bisa01g2559 688 MobiDBLite consensus disorder prediction 636 650 - -
Bisa01g2559 688 Pfam Wall-associated receptor kinase C-terminal 192 244 IPR032872 -
Bisa01g2559 688 FunFam Wall-associated receptor kinase-like 20 416 623 - -
Bisa01g2559 688 Gene3D Phosphorylase Kinase; domain 1 313 415 - -
Bisa01g2559 688 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Bisa01g2559 688 SUPERFAMILY Protein kinase-like (PK-like) 322 613 IPR011009 -
Bisa01g2559 688 MobiDBLite consensus disorder prediction 667 688 - -
Bisa01g2559 688 Pfam Wall-associated receptor kinase galacturonan-binding 34 99 IPR025287 GO:0030247
Bisa01g2559 688 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 682 IPR044652 GO:0004672
Bisa01g2559 688 SMART serkin_6 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2559 688 CDD STKc_IRAK 345 614 - -
Bisa01g2559 688 Pfam Protein tyrosine and serine/threonine kinase 342 611 IPR001245 GO:0004672|GO:0006468
Bisa01g2559 688 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2559 Bisa-ChrBisa01 49164299 49174234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2559 216 687 Receptor kinase-like Gene Family AT1G25390 54.757 4.27e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bisa01g2559 PK_Tyr_Ser-Thr 1e-48 CL0016