Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2553 ATGCTTCCTTTGATTTCGTTGCTGCTTCTTCATCTCTGTAACTATCTCTCACCTGTGACTTCTCTGAATGCCGAAGGCTCTGTTCTTTTGGCTCTTAAGCAGTCCATCACAGACCCAGAAGGGTCTATGAGTAACTGGAATTCTTCTGATGAAAACCCATGTTCGTGGAATGGGGTTACATGCAAGGAACAAAGTGTCGTGTCCATTAGTATTCCAAAGAGAAAGCTTTACGGGATTCTTCCTTCTGCTCTGGGATCTCTGTCTCAGCTTCGCCATATGAATTTCAGGAACAACAAGCTCTTTGGAAGCTTGCCTCAAGAGCTATTCGAAGCACAGGGACTTCAAAGCTTGGTCCTTTATGGCAATTCCTTTTCTGGGTCTGTTCCAAAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATATTTTCAATGGGTCTTTTCCTGCCGCCATTGTCCAATGCAAGAGACTCAAAGCCCTTGTTCTGAGTCATAACAATTTCACTGGTCCTCTCCCAGATCGATTTGGTACTGATTTGTTTTCTCTGGAAAAACTGGACCTTTCTTACAATTCCTTCAATGGTTCAATCCCTAGTGACATGGGAAATCTATCAAGCCTGCAAGGAACTGTTGATTTATCCCATAATAATTTTTCTGGTTCAATCCCTCCTAGCCTTGGAAATTTGCCTGAGAAGGTTTATATTGATCTTACTTTCAACAATTTGAGTGGTCCAATACCACAAAATGGTGCTTTAATTAACAGAGGACCTACGGCTTTTATTGGCAATCATGGTCTCTGTGGACCTCCTCTGAAGAACCCATGTTCTCCGCAAACTCCAGGTGCTAGCTCACCTTCCTCATTCCCATTTTTACCAGACAACTACCCACCTCAGGATTCTGATAATGGTGGGAAAACCAAAGGGCTAAGCAAGGGTGCTGTTATAGGCATTGTTGTTGGTGACATAGTTGCAATTTGCCTTTTGGGTTTGGTCTTCTCTTACTGCTACTCAAGGGTTTGTGGTCTCAATCAGGACATTGATGAAGCTGGTTTTGACAAGGGAGGCAAAGGGAGGAGGAAAGAGTGTTTGTGCTTCAGAAAGGATGAATCTGAGACTTTATCTGAGAATGTTGAGCAGTATGATCTTGTCCCATTAGACACCCAAGTGGCCTTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTCTGGGAAAGAGTGGAATAGGCATTGTCTACAAAGTGGTGCTTGAAGATGGGCTTACCCTAGCTGTGAGAAGATTGGGAGAAGGTGGTTCTCAAAGGTTTAAAGAATTTCAGACTGAAGTAGAAGCGATAGGAAGATTGAGGCATCCTAACATAGTTACTCTTAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTATATACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGGCTGGACTTGTTGCATTCACACCACTATCTTGGTCGATTCGGCTGACAATCATGAAAGGAATTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCTAAAAAGTATGTCCATGGAGACCTGAAGCCAAGTAACATACTGCTTGGGCATAACATGGAACCCCACATCTCTGATTTTGGACTTGGAAGACTAGCAAATATCGCTGGAGGCTCTCCAACCGTGCAATCTAACCGAGTGGTAGCCGAGAAACCGCATGAAAGGCAAAAGAGCTTATCTGCATCAGAAGTTGCAACTAATGTTTTGGGAACTGGGTATCAGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTATTCATATGGTGTGATTTTGCTAGAGATGATTACAGGAAGATTGCCCATTGTCCAGGTGGGAAACTTGGAAATGGACCTTGTCCAATGGATTCAGTTCTGCATTGAGGAGAAGAAGCCACTCTCAGACGTGTTAGACCCGTACTTGCCAGAAGATGCAGACAAGGAAGAGGAGATAATTGCAGTTTTGAAGATCGCGATGGCTTGCGTCCATAGCAGCCCTGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCTGTTTCTTCTGATTGA 2124 0.4374 MLPLISLLLLHLCNYLSPVTSLNAEGSVLLALKQSITDPEGSMSNWNSSDENPCSWNGVTCKEQSVVSISIPKRKLYGILPSALGSLSQLRHMNFRNNKLFGSLPQELFEAQGLQSLVLYGNSFSGSVPKEIGKLRYLQTLDLSQNIFNGSFPAAIVQCKRLKALVLSHNNFTGPLPDRFGTDLFSLEKLDLSYNSFNGSIPSDMGNLSSLQGTVDLSHNNFSGSIPPSLGNLPEKVYIDLTFNNLSGPIPQNGALINRGPTAFIGNHGLCGPPLKNPCSPQTPGASSPSSFPFLPDNYPPQDSDNGGKTKGLSKGAVIGIVVGDIVAICLLGLVFSYCYSRVCGLNQDIDEAGFDKGGKGRRKECLCFRKDESETLSENVEQYDLVPLDTQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGSLATAIHGKAGLVAFTPLSWSIRLTIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTVQSNRVVAEKPHERQKSLSASEVATNVLGTGYQAPEALKVVKPSQKWDVYSYGVILLEMITGRLPIVQVGNLEMDLVQWIQFCIEEKKPLSDVLDPYLPEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSVSSD 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2553 707 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 182 - -
Bisa01g2553 707 CDD STKc_IRAK 408 702 - -
Bisa01g2553 707 FunFam Leucine-rich repeat receptor-like protein kinase 385 477 - -
Bisa01g2553 707 Gene3D Phosphorylase Kinase; domain 1 370 477 - -
Bisa01g2553 707 SMART serkin_6 407 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2553 707 ProSiteProfiles Protein kinase domain profile. 402 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2553 707 Gene3D Transferase(Phosphotransferase) domain 1 478 707 - -
Bisa01g2553 707 Gene3D Ribonuclease Inhibitor 76 283 IPR032675 -
Bisa01g2553 707 Gene3D Ribonuclease Inhibitor 15 75 IPR032675 -
Bisa01g2553 707 Pfam Protein kinase domain 408 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2553 707 SUPERFAMILY Protein kinase-like (PK-like) 407 699 IPR011009 -
Bisa01g2553 707 PANTHER OS05G0588300 PROTEIN 132 702 - -
Bisa01g2553 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Bisa01g2553 707 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Bisa01g2553 707 FunFam Leucine-rich repeat protein kinase family protein 478 705 - -
Bisa01g2553 707 MobiDBLite consensus disorder prediction 276 309 - -
Bisa01g2553 707 SUPERFAMILY L domain-like 24 276 - -
Bisa01g2553 707 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Bisa01g2553 707 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2553 Bisa-ChrBisa01 49003704 49006252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2553 1 707 Receptor kinase-like Gene Family AT2G01210 68.750 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bisa01g2553 Pkinase 7.1e-35 CL0016