Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2552 ATGGATTCAAACACTTCAAGCTTTCTTTTGAACTCTTCAAATTTTCACTCAGGTTTCTACCCAGCCAAACAGGATGATGATGGCATGATTGATCTGGGTCTTAGTCTTAGAACTCTGCAACCTCAAACTTACCATTCTTCTAGCAACTTGTTGAGTATGGGGGGATATGATGACCTAGAGGATTGGCCACAGTCTAATCCCAACCTGAAGAGCTCAAGCACAGTGCAATCAAGAACTCTGTCAGAAAACTTTGATGAAGAGATAGATGGTGTACAGAGCAACCAGAGATGGGCTTATGTGAAGGCTAACATGGATGGGGTCACAGTTGGCAGAAAAATTTGCGTCCTTGATCATCAAGACTTCCTTAGTCTTGCAAACCAGTTAGACAACATGTTTGGAAACAAAACCGTTTGTGGTTTGAAGTTGTTCCAATCTGGGTCAGAGTACTCACTGTTGTACAAGGACAGAGAAGATCATTGGAGAACTGTAGGTGATGTTCCATGGAAAGAGTTTGTAGAATGTGTGACAAGGTTGAGGATTGCAAGAAAGAATGCAGCCTCTGTTTCCTGGTCTTCTAGCTACACCTGA 588 0.4252 MDSNTSSFLLNSSNFHSGFYPAKQDDDGMIDLGLSLRTLQPQTYHSSSNLLSMGGYDDLEDWPQSNPNLKSSSTVQSRTLSENFDEEIDGVQSNQRWAYVKANMDGVTVGRKICVLDHQDFLSLANQLDNMFGNKTVCGLKLFQSGSEYSLLYKDREDHWRTVGDVPWKEFVECVTRLRIARKNAASVSWSSSYT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2552 195 Gene3D - 91 193 - -
Bisa01g2552 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 60 186 IPR003311 GO:0005634|GO:0006355
Bisa01g2552 195 ProSiteProfiles PB1 domain profile. 97 185 IPR000270 GO:0005515
Bisa01g2552 195 Pfam AUX/IAA family 83 185 IPR033389 -
Bisa01g2552 195 SUPERFAMILY CAD & PB1 domains 98 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2552 Bisa-ChrBisa01 48990032 48991992 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2552 99 180 B3 DNA Binding Superfamily AT1G19850 39.024 8.87e-09 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bisa01g2552 AUX_IAA 2.7e-19 CL0072