Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2542 ATGCAGAGAGTTTGTGAATTTTGCACATCCTTGAGGCCACTTGTATACTGCAAGGCTGATGAAGCATATCTTTGTCTATCCTGTGATGCAAAGGTCCATTTAGCCAATGCATTGTCTAGCCGGCACATCCGAACCCTTCTGTGTAATCTATGCAGATACCATCTTGCCTATGTACAGTGTTTGGATCACCAAATTTTGATCTGCCATGGCTGTGATCAAAAGCTGCATGATCACTCCTTAAAACACAAGAAACGAGCTATCAGAAGTTACATGGGTTGCCCTTCTGCCAGAGACTTTGCGGCACTTTGGGGTCTTGAATTGAATGAGATAGAAAAGAATGCACATTCAGATAAGTTTGCATCCATTTCATATAGTTCTGCAGATTTAAATGTGGCACATGTCTCGGGACAGCTTGTTGTTCAAACTAGAAGCCCTTCAATTGTATCCAAGTCCAAATTTGAAGGGGGATCAAGCAGCCAACAAGGTCAGAAATTGTACAAAGACCAAGAACGACAAACTATTTTGCAGCAGGTTATTGATTTGAAAAGGCTTCAGCTCAGTGAAGAGAGTAATCATTCTCCAAAGGTGACTGGGCAACAAGAAACGGACTTATCTTCTTCAATATATCATACTCAAAAGAAATATGATGAAAAGTGTGGTCAGCAAGCACAAAATCCCAGGGATTTTACTAATAATGTTCTGGAAAAGGAGAGTCCTATGGCAGAGCCGGATCTTGAAAGTTTGTCTTCTACATTGTCTCAGCTTGATAATTTACCTTCATCTCCAATTATAGACCTTTCCTTGCACAGCGAGTTCTGGACATGCAGAAGTCCACTTCAAAGTAATCAGTTGTGGTCTGCTAATATTCAAGACCTTGGGATGTGTGAAGAGCTTATTAGTCAAGATGATTTTAACATACCTGATGTTGACTTAACATTCCAAAACTTTGAAGAACTGTTTGAAGGAGATCAAGATCCTGTTAGAGGACTGCTTGGTGATAATAATGTCTCCTGCTCTTCTATAGAGAAGGTTTCATCACTTGATAAGTCAGATATTTACAATGAAAGCACAATAGAGGATTCTTCGGAAGCTGTGTCCATTGCTATCTCCCAATCTGCTTATAAGGACGAGGTCGAGGATATTGATCCTCCCAACCTATATGATCCAATAAGCACGGACCCTCCTCAAACAATTAGACCATCTCATTCGACTATATCATTCTCTCTTTCAAGATTTAATGCTGAAAGCACTCTTACTGATCACCATGAAAGTGGCCTTTCTCCCCACTGTGAAGGGGAAGGCATGAAAAGCAAGCCCGACTTCAATCCAGGAAACCTGGAGCTAATGTATACTTGTGATGATGCAGTGAAGGCTAAAAATGAAGCTTACGCCTAG 1395 0.4086 MQRVCEFCTSLRPLVYCKADEAYLCLSCDAKVHLANALSSRHIRTLLCNLCRYHLAYVQCLDHQILICHGCDQKLHDHSLKHKKRAIRSYMGCPSARDFAALWGLELNEIEKNAHSDKFASISYSSADLNVAHVSGQLVVQTRSPSIVSKSKFEGGSSSQQGQKLYKDQERQTILQQVIDLKRLQLSEESNHSPKVTGQQETDLSSSIYHTQKKYDEKCGQQAQNPRDFTNNVLEKESPMAEPDLESLSSTLSQLDNLPSSPIIDLSLHSEFWTCRSPLQSNQLWSANIQDLGMCEELISQDDFNIPDVDLTFQNFEELFEGDQDPVRGLLGDNNVSCSSIEKVSSLDKSDIYNESTIEDSSEAVSIAISQSAYKDEVEDIDPPNLYDPISTDPPQTIRPSHSTISFSLSRFNAESTLTDHHESGLSPHCEGEGMKSKPDFNPGNLELMYTCDDAVKAKNEAYA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2542 464 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Bisa01g2542 464 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 317 - -
Bisa01g2542 464 CDD Bbox1_BBX-like 4 47 - -
Bisa01g2542 464 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa01g2542 464 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2542 Bisa-ChrBisa01 48753622 48758823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2542 1 350 C2C2-CO-like Transcription Factor Family AT1G68190 36.827 1.94e-61 202