Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2533 ATGGGATTGCAAAACCAGTTAAACGACGTCTCTTCGGGATCGATTCCGCTCCTCCTTTTGGCTCACATCGCCAACTGGTTCAATCACCTCCGTTCCTTCCTTCTCCGTTTTCTCCAATCGTTAGGTCTCTCAAGATTTGACCCCAACCGCGTCGCCGTCGATGACGCCCTCTTAACTGCCGTCGGATCGGGCTTCGCCGGCCTAATCATGCTCTCCGAGCAGCTCCACGCCAACCGCGACCTCTCCGACAGGTACGCCGTCGCCGTCGACGGCATCAGCGATGGCGATTCCAAGTGTGTGGTGTGCCAGAGCAAGTACAGGGACCAGGACCAGGTTCGCCGGCTCCCGTGCCGCCACGTTTTCCATAGACGATGCTTCGAAGGTTGGCTGGACCAACTCAAGTTTAACTGCCCACTCTGCCGATCGCCGGTAGTCTCCGAGGAGCGCGTGGCTCTTACGGAGCGGCGCGTCGGCAGCGAACTATTGTCCTGGTTCTCTTTGCGGTGA 507 0.5858 MGLQNQLNDVSSGSIPLLLLAHIANWFNHLRSFLLRFLQSLGLSRFDPNRVAVDDALLTAVGSGFAGLIMLSEQLHANRDLSDRYAVAVDGISDGDSKCVVCQSKYRDQDQVRRLPCRHVFHRRCFEGWLDQLKFNCPLCRSPVVSEERVALTERRVGSELLSWFSLR 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2533 168 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Bisa01g2533 168 PANTHER RING ZINC FINGER PROTEIN-RELATED 83 151 - -
Bisa01g2533 168 SMART ring_2 99 140 IPR001841 -
Bisa01g2533 168 Pfam Ring finger domain 98 141 IPR001841 -
Bisa01g2533 168 SUPERFAMILY RING/U-box 93 146 - -
Bisa01g2533 168 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 89 156 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2533 Bisa-ChrBisa01 48409629 48410135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2533 1 167 C3H Transcription Factor Family AT1G15100 51.497 2.37e-49 154