Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2501 ATGGGGGATCACTTTGTATTGCTGGTTGATCGATTGCTCACTGAATCCACATTACAAGCTGCACTTGAAAGCAGAAATCGTGCAATGCAGGAGGCTGCGTCATCAACAGTGAATGAAGCTGCAGAAGTTGATGTCCCTTTGATGAAGATGGGGCTTGAAAATGTCAAATCTCCGAGGAAAATTGTAGAATGCAAGATATGCCACGACGAGGATGAAGATTCCAATATGGAGGCACCCTGCTCATGCTGTGGTAGTTTGAAGTATGCCCACCGCCGATGTATACAACGTTGGTGTAATGAGAAGGGTGACACTATCTGTGAGATATGCCACCAGCAATTTAAACCTGGTTATACAGCTCCAGCTCCACTATTTCAATTTGGACGCATTCCAATGAGTTTCAGGGGAAACTGGGAGATTTCCAGAAGAGACTTGAACAGTACTCATTTGGTTAGCATGGTATCTACTGACCAGAATCTAATGAATTCTAATTACGATCAGTATTCAGCTTCTACTGCTGGAGGTTTCCTATGCTGTCGTTCAGTTGCTCTCATTTTCATGGTTCTACTGATTTTAAGACATGCTCTTCCCCTCTTATTCAGTGGAAACAGGGACTATTCCTTTCCACTCTTTATGTTGTTACTGTTTCGAACTGCGGGAATTGTTCTGCCTATATACTTCATGGTGAGAGCAGTGACATCTATACAGCGGCATCGGCGACAACAACGGGAGCCTCCTAATGCCTTGGTCAATCTATCCGATGTTGAAAGTGAGCAAGTAGCTCTGCAGCGTCAGCTTCATGTCATTCGCGTTCAGTGA 816 0.4436 MGDHFVLLVDRLLTESTLQAALESRNRAMQEAASSTVNEAAEVDVPLMKMGLENVKSPRKIVECKICHDEDEDSNMEAPCSCCGSLKYAHRRCIQRWCNEKGDTICEICHQQFKPGYTAPAPLFQFGRIPMSFRGNWEISRRDLNSTHLVSMVSTDQNLMNSNYDQYSASTAGGFLCCRSVALIFMVLLILRHALPLLFSGNRDYSFPLFMLLLFRTAGIVLPIYFMVRAVTSIQRHRRQQREPPNALVNLSDVESEQVALQRQLHVIRVQ 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2501 271 Pfam RING-variant domain 64 109 IPR011016 GO:0008270
Bisa01g2501 271 ProSiteProfiles Zinc finger RING-CH-type profile. 56 116 IPR011016 GO:0008270
Bisa01g2501 271 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 241 IPR033275 -
Bisa01g2501 271 FunFam Zinc finger family protein 53 119 - -
Bisa01g2501 271 CDD RING_CH-C4HC3_MARCH 64 110 - -
Bisa01g2501 271 SMART ringv_2 63 110 IPR011016 GO:0008270
Bisa01g2501 271 Pfam Protein of unknown function (DUF3675) 115 231 IPR022143 -
Bisa01g2501 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 119 IPR013083 -
Bisa01g2501 271 SUPERFAMILY RING/U-box 62 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2501 Bisa-ChrBisa01 47604375 47606584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2501 58 110 C3H Transcription Factor Family AT2G37950 44.643 1.40e-06 46.2