Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2486 ATGATGAACAGGAACGAGTTGCTTCTTATAGGGCTTATTGCCATCACAAGCCTCCTCTCTGAACCCGGGAACAATGATAGCAGCAGCGAGGCTCTATGGGACAACGGAAGAGCATGTGGAAGAAGGTACAGAGTAAGCTGCACCGGAGGAACCAACCAAGGGGTGGCTCAGCCGTGCAAGGCCGGCACCTCCGTCACCGTCACCATCATCGATCTCTGCCCTTCGCCGGGATGTCAAGCTACCTTGGATCTCTCCAAGGGGGCCTTCAATATCATCGCTAACCTTGATGCAGGCAAAATTTGTATCCAGTACACCCGGTTAGTACTTCTCTCTTAA 336 0.5238 MMNRNELLLIGLIAITSLLSEPGNNDSSSEALWDNGRACGRRYRVSCTGGTNQGVAQPCKAGTSVTVTIIDLCPSPGCQATLDLSKGAFNIIANLDAGKICIQYTRLVLLS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2486 111 CDD DPBB_EG45-like 29 105 - -
Bisa01g2486 111 SUPERFAMILY Barwin-like endoglucanases 28 106 IPR036908 -
Bisa01g2486 111 SMART dpbb_1 29 104 IPR007112 -
Bisa01g2486 111 Gene3D - 16 107 IPR036908 -
Bisa01g2486 111 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 28 105 IPR044206 GO:0009627|GO:0048046
Bisa01g2486 111 Pfam Lytic transglycolase 29 104 IPR009009 -
Bisa01g2486 111 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 29 107 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2486 Bisa-ChrBisa01 47190547 47192557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2486 24 107 Expansin Gene Family AT4G01630 30.208 3.16e-07 45.1