Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2485 ATGGGGATGATGAAAAGGAATGAGGTGCTTGTTATGGGGCTTATTGTATTCACAAGCCTCGTCTCTGTGGCTTCTGCCATTTCTGGAACTGCCACTTTTTATACTGTTTACTATCCAAATGCATGTGGGCTTCAGAATCAAGGAACGATGATAGCAGCAGCAAGCGAGGCTCTGTGGGATAACGGAGCAGCATGTGGAAGAATGTACAGAATAACATGCACTGCCGGAACCAACAGTGGGGTGGCTCAGCCGTGCAAGGCCGGCAGCGTCACCGTCAAGATCGTCGATCTCTGCCCCTCGCCGGGATGCCAAGGCACCTTCGATCTCTCCCAGGAAGCCTTCTCTGCCATCGCTGACCCTGACGAAGGCAAAATCCAAATCGACTACACCCAGTCAGGTCTGAACCTCGAGCAAGAGAACGTAGAAGAAGTAAGATGCAGGAAGAATATCGAGTTGAATGTGATATAA 468 0.5021 MGMMKRNEVLVMGLIVFTSLVSVASAISGTATFYTVYYPNACGLQNQGTMIAAASEALWDNGAACGRMYRITCTAGTNSGVAQPCKAGSVTVKIVDLCPSPGCQGTFDLSQEAFSAIADPDEGKIQIDYTQSGLNLEQENVEEVRCRKNIELNVI 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2485 155 Pfam Lytic transglycolase 52 129 IPR009009 -
Bisa01g2485 155 Gene3D - 19 132 IPR036908 -
Bisa01g2485 155 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 129 IPR007112 -
Bisa01g2485 155 SMART dpbb_1 51 129 IPR007112 -
Bisa01g2485 155 CDD DPBB_EG45-like 27 130 - -
Bisa01g2485 155 SUPERFAMILY Barwin-like endoglucanases 15 131 IPR036908 -
Bisa01g2485 155 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 6 131 IPR044206 GO:0009627|GO:0048046
Bisa01g2485 155 FunFam Barwin-related endoglucanase 26 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2485 Bisa-ChrBisa01 47168810 47170701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2485 10 155 Expansin Gene Family AT4G01630 28.824 2.06e-08 50.1