Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2475 ATGAGGAAGCCTTGCTGTGATAAGGTGGATATGAACAAAGGAGCTTGGTCCAAACAAGAAGACCAAAAGCTCATTGATTACATCAAGACCCATGGCGACGGCTGCTGGCGTACCCTCCCTCAAGCAGCCGGCTTACTTCGCTGCGGTAAAAGTTGTAGACTGAGATGGATAAACTATCTAAGGCCAGACCTTAAAAGAGGCAACTTTGCTGAAGATGAAGAAGATCTCATCATCAAGCTTCATGCCCTCCTAGGCAATAGGTGGTCACTGATAGCTGGAAGATTGCCGGGACGAACTGATAATGAAGTGAAGAACTACTGGAACTCTCACTTGAAAAGAAAGCTCATAAACAGAGGCATTGATCCAAACAATCATCGGTTAATTCGAAACCCACTGTTAAAATGTGGTAGCTCAGCATCATCATATAATTGCTCGAAAGACATTATGAACAATGCCAAGAACAATGAGCAAAAAAAACAAAATGGTAGCGACAATTATAATTATGATCAAGTCTCAGATATTGCAGCATCGAGTGAGTACTTGGACGAACAGTCATTTTTCTTACCAGATTTGAACCTTGATCTCACCATGAGCAATAATGATTGCTGA 609 0.4187 MRKPCCDKVDMNKGAWSKQEDQKLIDYIKTHGDGCWRTLPQAAGLLRCGKSCRLRWINYLRPDLKRGNFAEDEEDLIIKLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHLKRKLINRGIDPNNHRLIRNPLLKCGSSASSYNCSKDIMNNAKNNEQKKQNGSDNYNYDQVSDIAASSEYLDEQSFFLPDLNLDLTMSNNDC 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2475 202 FunFam MYB-related transcription factor 12 65 - -
Bisa01g2475 202 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Bisa01g2475 202 Gene3D - 13 65 - -
Bisa01g2475 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Bisa01g2475 202 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Bisa01g2475 202 FunFam MYB transcription factor 67 128 - -
Bisa01g2475 202 CDD SANT 68 111 IPR001005 -
Bisa01g2475 202 CDD SANT 15 60 IPR001005 -
Bisa01g2475 202 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 165 - -
Bisa01g2475 202 Gene3D - 68 115 - -
Bisa01g2475 202 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Bisa01g2475 202 SMART sant 65 113 IPR001005 -
Bisa01g2475 202 SMART sant 12 62 IPR001005 -
Bisa01g2475 202 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Bisa01g2475 202 Pfam Myb-like DNA-binding domain 66 111 IPR001005 -
Bisa01g2475 202 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2475 Bisa-ChrBisa01 46895118 46896367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2475 2 201 MYB Transcription Factor Family AT4G38620 55.072 1.82e-79 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g2475 Myb_DNA-binding 3.2e-14 CL0123