Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2468 ATGGAGGCTGACAGAGTAGGGTCTGCGTCCTCTTACTACTCCGTTCTCGGCGTCGACTCGGATTCTTCCCTTGAAGAAATAAGGCGTGCATATCGCAAGCTTGCAATGCAATGGCATCCAGATAGGTGGACAAGAACGCCCTCTTTACTGGGTGAAGCCAAACGGAAGTTCCAGCAGATTCAGGAAGCCTATTCAGTGTTATCAGACCACAACAAAAGAACGATGTACGATGCAGGCTTGTACGACCCTCAAGAAGAAGAGGATGAGGGGTTTTCTGCTTTTGTGGAAGAAATGGTGTCCCTGATGACTCAAGTGAGCAAAGAGGATAAGGAGTACAGTATGGAGGAGTTACAGAGCATGCTTAGGGAGATGGCTGAAGGATTTGAGAATCCATCATGGCATTATGGTCCCTCACCAGCTGTCGATGAAACCCAATGCTCAAAGAGGGCTCGTCTGGATTCGAACTTGAAGGTGAATTCAGGGGCACATTTTCATCACACTGGCCTCTATATGCATGAAACAAGGGGTTATTGTAATTAG 540 0.4741 MEADRVGSASSYYSVLGVDSDSSLEEIRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDHNKRTMYDAGLYDPQEEEDEGFSAFVEEMVSLMTQVSKEDKEYSMEELQSMLREMAEGFENPSWHYGPSPAVDETQCSKRARLDSNLKVNSGAHFHHTGLYMHETRGYCN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2468 179 PANTHER PUTATIVE, EXPRESSED-RELATED 7 138 - -
Bisa01g2468 179 Pfam DnaJ domain 12 77 IPR001623 -
Bisa01g2468 179 Gene3D DnaJ domain 8 130 IPR036869 -
Bisa01g2468 179 SMART dnaj_3 10 72 IPR001623 -
Bisa01g2468 179 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Bisa01g2468 179 CDD DnaJ 12 69 IPR001623 -
Bisa01g2468 179 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Bisa01g2468 179 PRINTS DnaJ domain signature 52 72 IPR001623 -
Bisa01g2468 179 PRINTS DnaJ domain signature 13 31 IPR001623 -
Bisa01g2468 179 PRINTS DnaJ domain signature 31 46 IPR001623 -
Bisa01g2468 179 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2468 Bisa-ChrBisa01 46620391 46621691 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2468 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 1.82e-12 62.8