Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2455 ATGCCCCCTTCTACCTCGTCCATCTCTGTTAAGGGCTTGTTGCTGCTACGAAATATGCTTGGTAAAGAATTTTTCACTGAGTATGGGGAGGCAAGTCGGTACGAAATTCAAGAAGTGGTTGGCAAGGGCAGCTATGGTGTTGTTGCATCTGCAGTTGATACCTACACTGGAGAGAGGGTAGCTATCAAGAAGATGAACAATGTCTTTGAACATGTTTCTGATGCCACACGCATTCTACGAGAAATAAAGCTCCTTCGGCTGCTCAAACATCCAGATATTGTAGAAATAAAGCACATTTTGCTTCCTCCATGCCGAAGAGAATTCAAAGACATTTATGTGGTCTTCGAGTTGATGGAATCTGATCTTGATGAAGTTATTGAAGCAAACCATGACCTCACATCCGGACATCACCAATTCTTTTTGTACCAGCTTCTTCGAGCTTTGAAATATATACATTCAGCAAATGTCTTCCACCGAGACTTGAAACCAAAAAACATTCTGGCTAATTCAGACTGCAAACTAAAGATTTGTGATTTTGGACTTGCTCGTGCATCTTTTGGTGATGCCCCTTCTACCATTTTTTGGACAGATTATGTTGCGACTCGATGGTACCGTGCACCCGAGCTATGTGGTTCTTTCTTCTCCAAGTATACCCCTGCTGTAGATATCTGGAGTATAGGATGTATTTTTGCAGAAATGCTGACTGGTGAACCTCTATTCCCCGGAAATAATGTCGGACATCAATTGGATCTCATAACAGACTTGCTGGGAACTCCTTCTGAATCTATTGCTAGGATTAGGAATGAAACAGCTAGGAGATATTTGAATAGCATGGGGAGAAAACCATCTATTCCTTTCTCCGAAAAATTCCCTCATGCAGACCCAATGGCTCTTCGTTTACTTCAGCGCTTGCTTGCCTTTGATCCTAAGCAGCGTCCATCTGCTGAAGAGGCATTAGCTGATCCCTATTTTTATGGGTTAGCAAATTTGGCTCAGGAAATATCCATGAAACCTATTTCCAAGTTTGAGTTCGAGTTTGAAAGGAGAAAATTGACCAAAGATGATGTAAGAGAACTAATTTATAGAGAGATTTTAGAATATCATCCAGAGATGCTGCAGGAGTACCTTCAAGGTGCAGAAAAGACTAGATTTATGTATCCCAGTGGACTTGATGGCTTCAAGCAGCAATTTGCTGATCTTGAGGAAAATAATGGCAAAGGAGAAAGAAGCTCACTACTCCATAGGAAATATGCCTCATTGCCAAGGGAGCGGGTCTGTGCAGACAAGGAAGAGGAGACTGATGGTGAGAATTCATTTGAGAACAACAATAGAGCTTCTGTCATGCGTGCAACCTTTCAGAGTCCTCCAAGATCCCTGAGCACTAAAAAATTGGAAGACGCCTGCAGAAATTCATTAACAATGCGGGGCAACTATTGCAAATCTGCTTACAATGGTCATAGACTTGTTAAGAGTGCTAGTATGAGTGCTTCCATGTGTGTGGCTGTTATGGAACAGAAACCAGGAGGTAGAAAATGA 1536 0.4206 MPPSTSSISVKGLLLLRNMLGKEFFTEYGEASRYEIQEVVGKGSYGVVASAVDTYTGERVAIKKMNNVFEHVSDATRILREIKLLRLLKHPDIVEIKHILLPPCRREFKDIYVVFELMESDLDEVIEANHDLTSGHHQFFLYQLLRALKYIHSANVFHRDLKPKNILANSDCKLKICDFGLARASFGDAPSTIFWTDYVATRWYRAPELCGSFFSKYTPAVDIWSIGCIFAEMLTGEPLFPGNNVGHQLDLITDLLGTPSESIARIRNETARRYLNSMGRKPSIPFSEKFPHADPMALRLLQRLLAFDPKQRPSAEEALADPYFYGLANLAQEISMKPISKFEFEFERRKLTKDDVRELIYREILEYHPEMLQEYLQGAEKTRFMYPSGLDGFKQQFADLEENNGKGERSSLLHRKYASLPRERVCADKEEETDGENSFENNNRASVMRATFQSPPRSLSTKKLEDACRNSLTMRGNYCKSAYNGHRLVKSASMSASMCVAVMEQKPGGRK 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2455 511 SUPERFAMILY Protein kinase-like (PK-like) 30 327 IPR011009 -
Bisa01g2455 511 FunFam Mitogen-activated protein kinase 120 347 - -
Bisa01g2455 511 CDD STKc_TDY_MAPK 33 369 - -
Bisa01g2455 511 SMART serkin_6 34 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2455 511 ProSitePatterns MAP kinase signature. 69 172 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bisa01g2455 511 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 33 374 - -
Bisa01g2455 511 ProSitePatterns Protein kinases ATP-binding region signature. 40 64 IPR017441 GO:0005524
Bisa01g2455 511 Gene3D Transferase(Phosphotransferase) domain 1 120 347 - -
Bisa01g2455 511 ProSiteProfiles Protein kinase domain profile. 34 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2455 511 FunFam Mitogen-activated protein kinase 21 127 - -
Bisa01g2455 511 Pfam Protein kinase domain 34 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2455 511 Gene3D Phosphorylase Kinase; domain 1 50 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2455 Bisa-ChrBisa01 46339018 46347727 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2455 20 502 MAP Kinase Gene Family AT3G18040 73.347 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Bisa01g2455 Pkinase 6.6e-68 CL0016