Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2448 ATGCAGAAGCAATCGCAGTCGCAGCAGAGTTCATCAAGGTGGACCCCAACACCAGCTCAGTTACTGATTCTTGAAGAACTGTACAGGCAAGGGACCAAGACCCCTACGGCTGAACAAATCCAGCAAATAGCCTCGCAGCTACGTCGTTTTGGCAAGATCGAAGGCAAGAACGTCTTCTACTGGTTTCAGAACCACAAAGCAAGGGAGCGCCAGAAACGACGTCGTTGGGAGATGGAGGAAGCCGCTTCTGCTTCCCATCCCGCTCAACGTAAACCTTTGTACCTTAATATGGGACCCTCACAGGAAAAGCATGACGCTGCAGAGCTGAGAGGAACAGGTTATGAAGTTAAAGAGACAAAGAAGGGAGCATCTTCCTCATGCTGCAGAGGGCCAGCGCAGCAACCTGTTTCGCCACTGGAAACAGCAGAAAGTGGACCAAATGGGTGGACTAAACTCGAAGAGAGAAGACTTCAAATTTTGAAAAACACAAACAACACTTCAGCATCAGATCACAGAACAAGTTACACCTATTGTGATGATGAAGAACATGCAAATACTAGGACCCTTGAGCTTTTTCCACTCAAGAGGGATTTCTCTCTCAATGAAAGCAAATCTAGATTCTGTGCCTCAAATTTTCCTGGCACTGAAATAACATCAAGCCAGTTTTTTGAGTTTCTTCCTTTAAAGACTGAAGGAAACTAA 702 0.4601 MQKQSQSQQSSSRWTPTPAQLLILEELYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRWEMEEAASASHPAQRKPLYLNMGPSQEKHDAAELRGTGYEVKETKKGASSSCCRGPAQQPVSPLETAESGPNGWTKLEERRLQILKNTNNTSASDHRTSYTYCDDEEHANTRTLELFPLKRDFSLNESKSRFCASNFPGTEITSSQFFEFLPLKTEGN 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2448 233 MobiDBLite consensus disorder prediction 122 147 - -
Bisa01g2448 233 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 205 IPR044555 GO:0003700|GO:0099402
Bisa01g2448 233 CDD homeodomain 13 73 IPR001356 GO:0003677
Bisa01g2448 233 SMART HOX_1 9 76 IPR001356 GO:0003677
Bisa01g2448 233 Pfam Homeodomain 11 71 IPR001356 GO:0003677
Bisa01g2448 233 FunFam WUSCHEL-related homeobox 11 11 78 - -
Bisa01g2448 233 SUPERFAMILY Homeodomain-like 6 75 IPR009057 -
Bisa01g2448 233 Gene3D - 11 77 - -
Bisa01g2448 233 MobiDBLite consensus disorder prediction 126 144 - -
Bisa01g2448 233 ProSiteProfiles 'Homeobox' domain profile. 7 72 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2448 Bisa-ChrBisa01 46203819 46208256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2448 11 135 Wox Gene Family AT3G18010 52.000 3.55e-34 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bisa01g2448 Homeodomain 5e-20 CL0123