Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2439 ATGATTATTGTACCCGAGATGATTGGGAGCATAATTGGAGTATACAACGGCAAGACTTTCAACCAGGTTGAGATCAAACCTGAGATGATTAGCCATTACTTGGCAGAGTTCTCAATTTCATACAAGCCTGTCAAGCATGGTAGACAATGCAGAGGTCCAAAAGGGAAGCATTCCTTCCACATCAATCTCTTCTCTGCCCTTGTTTCTTAG 210 0.4238 MIIVPEMIGSIIGVYNGKTFNQVEIKPEMISHYLAEFSISYKPVKHGRQCRGPKGKHSFHINLFSALVS 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2439 69 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 1 59 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa01g2439 69 Gene3D 30s Ribosomal Protein S19; Chain A 1 63 IPR023575 GO:0003735|GO:0005840|GO:0006412
Bisa01g2439 69 ProSitePatterns Ribosomal protein S19 signature. 16 40 IPR020934 GO:0003723
Bisa01g2439 69 SUPERFAMILY Ribosomal protein S19 1 47 IPR023575 GO:0003735|GO:0005840|GO:0006412
Bisa01g2439 69 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 1 62 IPR002222 GO:0003735|GO:0005840|GO:0006412
Bisa01g2439 69 Pfam Ribosomal protein S19 1 46 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2439 Bisa-ChrBisa01 45902725 45905019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2439 1 59 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 81.356 1.77e-29 100