Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2414 ATGTTCGTCTCAACAATCCCAACACCCTCTAAGCTGAACCTTTCGCATTTCGTCCTACTCGTGCCGAAGACCAACGTGGAAATCCTTCCTAGCGGAACCAAAAAGTACCGGAGAAGCAGAGTGTCAGTTTATTCCAAATTAACCCATAGGAGTCGTAGTGTCCACTACAAATCGCACTTTAGACCTGTAGTAACTGCAAGGGTTAATGGTGGCGATGGTGCGTTGGACGCCACCTCACAACAGTCATCTTCTATTGACATTGAAGAAGACAAGAGTACTTCTTCTGGCCTTGGCAATGGCTATGTTGCCTTGTTTGTTCGTATGTTAGGCTTAGATCATGATCTTCTTGATAGAGAACAGGCTATAAATGCTCTCTGGAAATATTCACTTGGTGGAAAGAAGTGTATCGATAATTTAATGCGGTTTCCTGGTTGTATTAATCTTACTGTGAACCTCCTTAGATCAGAGTCTAGTTCAGCATGTGAAGCAGCTGCAGGCCTTCTGCGATGTATATCTTCAGTCAATCTATACAGGAATTATGTAGCCGAGAGTGGAGCAATAGAAGAGATAAGTAGATTACTGAGGCAGTCTTCCTTGGCTCCTGAGGTAAAGGAGCAGGGTATGAGTACATTGTGGAATTTATCTGTAGATGAGAAGCTCCGCATTGAACTTGCAAAGAGTGATGTCCTGCCATTGATTATTAAGTACCTTGATGACGAGGAAATAAAAGTGAAGGAAGCTGCAGGAGGCATATTGGCAAATTTGTCATTGAGCCATGTCAACCACAGCATTTTAGTGGAAGCAGGTGTTATACCAAAATTGGCAAAGTTCTTAACTTCTTATTCGGAAGGATCTGAAGTCATTAAAAAGGAAGCAAGGAATGCTTTGCTGGAGCTTGTTAAGGATGAATACTATAGAATTCTTATTGTTGAGGAAGGTCTGGTTCCTGTGCCATTAATTGGTGCCACAGCCTATAAGTCATTCACCCCTGATCTGCATTCATGGCCCACATTGCCAGATGGTACAGAGATTGAGCAGACTTCAAGAGAACCTTCCAGGTTTGGTGCATCAGAATTACTTCTTGGACTAAACATTAATGACAGTAATGCTAACATAGAGGAATCAAAAATGAATGCGATTGTTGGACGGACACAACAACAATTCCTTGCTCGTATTGGGGCTATAGAATGGAAAGGAAAAAGAACATCTGATTCCGAAAGCTCTGATAATCAGCAACTTACTCTCTTACCTTGGATGGATGGTGTTGCTCGCTTGGTACTGATTCTTGAACTAGAAGACAAGTTAGCCATAACAAGGGCTGCAGAGTCAATTGCTGATGTTTCTATAAATGAACATATGCGCATTGCATTCAAGGAGGCTGGAGCAATTAAGCATTTGGTTCGGCTTTTGACTTGTGGTGATCATGCTGTCAGATTGGCTGTAACTGGAGCTTTGGAGAGGTTGTCTGCCAGCAATGTAGTTTGCCAGATAATTGAAGCTGAGGGTGTCTTAGGTTCTTTAATTAATATTCTGAAATGCTCAGAGATTTCTGAAACTATAGCTTCAAAGTCTTTGAACACAATTGCTCGCATATTAGACCCCAGTAAAGAGATGAAATTGAAGTTTTATGATGGACCAGTTAATGGATCTGAGAAGGTCTTTGCTGGAGTTAAAAGTGATGCTGTTTCAACTGGATTAAGTACCTCTGAAAAAAATATTTCAAAAAAATTTACCAGGAATGATGTACTGGATTCTGCTTTAATTGCTCGCCTTGTTGAAATTCTGAAGTCTTCTTCTCCCAGTTTACAAGGAAAAGCTGCAGCAGTTCTCGAGTTTGTGGCACTGATTGACCCAACTATGGTCTCTATTATATCTGTGGATGTTGAATCTGGTCTAGATACTGTTTTTCAGCAAAAAATTTTGAGAATTTCAGATGGGGAATCTGATATGGAAGATCAGCTTTTAGAAGCATACCCAATTGAAATTGAAGAAGCTGGTCTTGCAATTTCTGCAGCATCCCGTTTAATGACGAGACTACTCGATTGTGAGCAGTTCTGCAACAAAATTGATTCCTCCCATTTCATTAGCTTGCTTCGAGAAATCCTCAAGTCTTGTATTCCTCTTCACTGCAAAGATTGGGTGGCTGCTTGCCTAGTTAAACTCAGTTCTCTTTCCAGTCACAACCCAAGTTTTAATCCAATCAACGTGGAAGTCACGCTTTATGAGACAGTTCCAAGACTAGTAGAACAGATCAAAACATCATTCTCTACAGAAACACAGGAAGCCGCTGTTATTGAACTGAACAGAATAATATCTGAAGGAGTGGTAGATTCTTCAAGAGCTATTATTTCTGAGGGGGCAATATATCCATTGGTGAAGCTGATAGAAGAAGGCAGTGAGAAGACTGTAGAAGCAGGATTGGCAATACTGTATAATCTGAGCATGGACAGTGAGAACCATTCAGCAATTATGGCTGCTGGAGTAGTCCCAGTATTGAGGAGGATTGTTCTGTCACAAAGGCCACAGTGGGTAAGGGCACTTCGTTTGCTGAGGAGTTTGCCTACATGA 2568 0.4128 MFVSTIPTPSKLNLSHFVLLVPKTNVEILPSGTKKYRRSRVSVYSKLTHRSRSVHYKSHFRPVVTARVNGGDGALDATSQQSSSIDIEEDKSTSSGLGNGYVALFVRMLGLDHDLLDREQAINALWKYSLGGKKCIDNLMRFPGCINLTVNLLRSESSSACEAAAGLLRCISSVNLYRNYVAESGAIEEISRLLRQSSLAPEVKEQGMSTLWNLSVDEKLRIELAKSDVLPLIIKYLDDEEIKVKEAAGGILANLSLSHVNHSILVEAGVIPKLAKFLTSYSEGSEVIKKEARNALLELVKDEYYRILIVEEGLVPVPLIGATAYKSFTPDLHSWPTLPDGTEIEQTSREPSRFGASELLLGLNINDSNANIEESKMNAIVGRTQQQFLARIGAIEWKGKRTSDSESSDNQQLTLLPWMDGVARLVLILELEDKLAITRAAESIADVSINEHMRIAFKEAGAIKHLVRLLTCGDHAVRLAVTGALERLSASNVVCQIIEAEGVLGSLINILKCSEISETIASKSLNTIARILDPSKEMKLKFYDGPVNGSEKVFAGVKSDAVSTGLSTSEKNISKKFTRNDVLDSALIARLVEILKSSSPSLQGKAAAVLEFVALIDPTMVSIISVDVESGLDTVFQQKILRISDGESDMEDQLLEAYPIEIEEAGLAISAASRLMTRLLDCEQFCNKIDSSHFISLLREILKSCIPLHCKDWVAACLVKLSSLSSHNPSFNPINVEVTLYETVPRLVEQIKTSFSTETQEAAVIELNRIISEGVVDSSRAIISEGAIYPLVKLIEEGSEKTVEAGLAILYNLSMDSENHSAIMAAGVVPVLRRIVLSQRPQWVRALRLLRSLPT 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2414 855 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 48 855 - -
Bisa01g2414 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 228 270 IPR000225 GO:0005515
Bisa01g2414 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 185 218 IPR000225 GO:0005515
Bisa01g2414 855 Gene3D - 640 854 IPR011989 -
Bisa01g2414 855 SUPERFAMILY ARM repeat 102 533 IPR016024 -
Bisa01g2414 855 Pfam Armadillo/beta-catenin-like repeat 450 490 IPR000225 GO:0005515
Bisa01g2414 855 Gene3D - 405 631 IPR011989 -
Bisa01g2414 855 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 786 828 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 574 615 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 132 173 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 217 257 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 491 533 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 450 490 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 258 301 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 174 216 IPR000225 GO:0005515
Bisa01g2414 855 SMART arm_5 775 815 IPR000225 GO:0005515
Bisa01g2414 855 MobiDBLite consensus disorder prediction 71 94 - -
Bisa01g2414 855 Gene3D - 75 326 IPR011989 -
Bisa01g2414 855 SUPERFAMILY ARM repeat 671 844 IPR016024 -
Bisa01g2414 855 MobiDBLite consensus disorder prediction 74 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2414 117 381 U-box Gene Family AT1G23030 26.667 1.87e-11 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2414 01 45169099 45178220 Bisa01g2414 01 45169099 45178220 ECH