Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2409 ATGTTGGAGGATGGGACACAGATTGCCGTGTGGAAGCAATGGGATGGAGAGATAGAGGAGTTCTTGATGAAAGAGATAGAATGGTTGAGTCGCCTGCATCACTGCAACGTGGCGAAAATGTACGGATACTACGCTCATGACGAAGAAATTCTGATTGTTTTTAAGTATTATCCCAATAATCTTCGAGGGCTTTTAGAGACATCTGAGGGGAGAGGACAACTTGATTGGGCAAGGAGATATAAAATAATGCAAGGCATCGCAAGTGGTTTGAATTATCTTCACAGTGGCTCCCAAAATGGCATCGTCCTCCACCGTTACATAATGCCCAGCAATATCTGGCTTGATCATGAATGGAACCCATTGATTGCTGGCTTTCACTTAGGAGCACAACTCCTTGAAGATCAAACCACTTTCACTAACCGAATAGTTGGGACTTGTTACAGTGAATATGTAGCTCCAGAACATATGGCAAGGGGATATGCAGCAGTAAAGATAGACGTGTATAGTTTTGGCGTCACAATGTTGGAGCTCATCAGTGGCAAAGGAACCGTCTTTTATGAGCTACAAGCGCAAGCAGTAGCACAACTAACTGATTGGGCAACAGAACTTTACAAGAAAGGCAAGATCTCAGAGATTGTGGACCCTGTTTTAGCATATTCGGCTATAAGAGAGGAAGTGGAAAACTGCATTAAAATAAGTTTATTGTGCATTCAGTGGAATCCAAATTCACGTCCCCAAATGGCGGATGTTGTATCCATGTTAGAAGGAAAATGGGGCCATACAGAGACACCAATTTGTGCTCAAGATGATGAATTTGAAGAAGCAGTTCGCGTTGGGGAAGAATTTTCTTATAATGTACCAATGGAGGAGCATGAGGCACAACATGAAAATTTTGAGGAAAAAATAGCTACTCATAATTGTCAAAAGTTTTCCTATGAAACCTTATATGATGCTACCAACAAATTTTCTTCCCAAAATGTGATAGGTCGTGGTGGCTTTGGACTCGTCTACAAGGGGAAGTTGGAGAATGGGAGAGAGATTGCAGTGAAGAAGGCATTATCAATGTCAGAAGAATTGAGGAAAGCATTGATGGAGATAGATTTGCTAAGTAGAGTGAAGCACCCCAATGTGGTGAAATTAGTTGGTTATTGCACCGATAACAATGAACTCTCTCTTGTTTCTGAGTATGTTCCTAACAAGAGTCTTGACAAGCTTTTAGTTGAGTATTTGGATAATGGACATGTGTCAGTCAAGACAGACGTATATAGTTTTGGGGTGTTGGTGTTAGAGCTTATCAGTGGCACAAGATTCTCATTTATTCAGCAAGAGGACAAAGCTATAAGCCTACTTGACTGGGCATACAAACTTTTCAAGACAGGTAGGGTCTTAAAAATCATGGATAGAGCTTTAGCAGATTCGGCAGTGGTGGAACAAGTGAAAAATTGCATCATAATAGGTTTACTATGTGTTCAAGGTGACCCAAAGTCACGTCCCGACATGGAGTGTGTTATATCCATGTTAACAGGTCGACAAGGCCGTAGAGAAATGTTAATTCGTAGACCAGGAATCTATGGTTACAGAGGATATCACTCAGGCAGCCCTTTTGGTGATCTTATGATTTTAAGTAAAAATATGCAACATTTGGAGAAGCAACACAATATCAGTGTTCAGTCTGAAGCACAAGTCCCACTAGTGGATGAGGATCAAAGCCAGGGTAGTGCTTCTTCAAATTCAACTGAATTTATGTTAGAAGATCCATATACTAACTCCAATACAATTCTTGCCCAAGATGACAGTGGTGAGACTGAGCTCCTTATCTTCCTTCTTTCTCAAGTTCAAAATTTTAATTTTGTGATAACGTAG 1863 0.4074 MLEDGTQIAVWKQWDGEIEEFLMKEIEWLSRLHHCNVAKMYGYYAHDEEILIVFKYYPNNLRGLLETSEGRGQLDWARRYKIMQGIASGLNYLHSGSQNGIVLHRYIMPSNIWLDHEWNPLIAGFHLGAQLLEDQTTFTNRIVGTCYSEYVAPEHMARGYAAVKIDVYSFGVTMLELISGKGTVFYELQAQAVAQLTDWATELYKKGKISEIVDPVLAYSAIREEVENCIKISLLCIQWNPNSRPQMADVVSMLEGKWGHTETPICAQDDEFEEAVRVGEEFSYNVPMEEHEAQHENFEEKIATHNCQKFSYETLYDATNKFSSQNVIGRGGFGLVYKGKLENGREIAVKKALSMSEELRKALMEIDLLSRVKHPNVVKLVGYCTDNNELSLVSEYVPNKSLDKLLVEYLDNGHVSVKTDVYSFGVLVLELISGTRFSFIQQEDKAISLLDWAYKLFKTGRVLKIMDRALADSAVVEQVKNCIIIGLLCVQGDPKSRPDMECVISMLTGRQGRREMLIRRPGIYGYRGYHSGSPFGDLMILSKNMQHLEKQHNISVQSEAQVPLVDEDQSQGSASSNSTEFMLEDPYTNSNTILAQDDSGETELLIFLLSQVQNFNFVIT 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2409 620 SUPERFAMILY Protein kinase-like (PK-like) 307 519 IPR011009 -
Bisa01g2409 620 Gene3D Transferase(Phosphotransferase) domain 1 394 518 - -
Bisa01g2409 620 Gene3D Transferase(Phosphotransferase) domain 1 59 277 - -
Bisa01g2409 620 Pfam Protein kinase domain 20 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2409 620 Pfam Protein kinase domain 324 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2409 620 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 257 - -
Bisa01g2409 620 Gene3D Phosphorylase Kinase; domain 1 1 57 - -
Bisa01g2409 620 Coils Coil 288 308 - -
Bisa01g2409 620 SUPERFAMILY Protein kinase-like (PK-like) 4 261 IPR011009 -
Bisa01g2409 620 FunFam receptor-like protein kinase FERONIA 286 396 - -
Bisa01g2409 620 Gene3D Phosphorylase Kinase; domain 1 283 393 - -
Bisa01g2409 620 ProSiteProfiles Protein kinase domain profile. 322 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2409 620 FunFam cysteine-rich receptor-like protein kinase 10 58 260 - -
Bisa01g2409 620 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Bisa01g2409 620 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2409 Bisa-ChrBisa01 45112040 45116608 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2409 408 591 Receptor kinase-like Gene Family AT1G53430 30.435 1.61e-16 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g2409 Pkinase 2.9e-26 CL0016