Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2408 ATGTTATCAACATTTTGGCAGGGTGAGGGACGCAAAGGTCCATACTTGGAAATCTTAGGTGCCCTGGACTGCAAGTCCTTTTCCTATGAGACCTTAGCTTCTGCTACTCAAAACTTTCGTCCTGGAAATAAGTTTCATGAAGATGGCTTCGGAATGTTGGAGGATGGGACAGAGATTGCCGTGGGGAAGCCAAATCCAAGGGAAGGAGATCAAAGGAAGGACTTAAGCCAAATCCAATGGTTGAGTCGCCTGCATCACCCCAATGTGGAGAAATTTTACGGATACTGCGCTCATAACAACCAACTTCTATTTGTTTATAAGTATTATCCCGATTGTCTTGGCGAGCTTTTAAACAAGCAGCTTGATTGGAGGCAGAGGTTGAATTATCTTCACAGTGGCTCCCGAAATGGCATCATCCTTCACAGTGACATAAAGCCCGACAATATCTGGCTTGATCAAGAATGGAACCCATTGATTGGTGACTTTTACTTTGGAAGGCAAATACTTGAAGATGAAACCTCTGCACATGAACTTTTCAAGGAAGGCAAGATCTCAGAGATCGTGGACCTTATTTTAGCATATTCAATGTATAGGGAGCAAGCGGAAAACTGCGTTAAAATAAGCATATTGTGCGTTCAATTGAATCCAAATTCACGTCCCCGAATGGAGGATGTTGTATTCATGTTAGCAGGGACATTGGGTCATATAGAGACACCGATTTTTCCTCATGATGATGAATTTGAAGAAGCAGTTGGCGTTGGAGAAGAATTTTCTTATGATGTGCCAATGGAGGAGCATAGTAACTCATTCACAGTCCATCCTCAAGATGACCATGAGGCACAACATGAAAATTTTGAGGAAAAAATAGCTGCCCAGAATTGTCAAAAGTTTTCCTATGAAACCTTATATGATGCTACCAACAAATTTGCTTCCCAAAATGTGCTAGGTCGTGGCGGTTTTGGACTCATCTACAAGGGGAAGTTGAACAATGGGAGAGAGATTGCAGTGAAGAAGTCATTAACAATGTCAAAAGAACTGAGGAAAGCATTGATAAGGGAGGTAGATTTGCTGAGTAGAGTGAAGCACCCCAATGTGGTGAAATTGATTGGTTATTGCACCGATAACAGTGAACTTTTAATTGTTTCTGAGGGATATATCGCTCCAGAGTATTTGGATAATGGACATGTGTCAGTCAAGACAGACGTATACAGTTTTGGAGTTTTGATGTTAGAACTTATCAGTGGCAAAAGAGTCTCATCTATGCCACCTCCAGAGGACAATGCTATAAGCCTACTTGATTGGGCATACAAACTTTTCAAGACAGGTAGGATCTTAGAGTTCATGGATAGAGCTTTAGCAGATTCGGAAATGGTGGAACAAGTGAAAAACTGCATCATAATAGGTTTACTATGTGCTCAAGGTGACCCAAAGTTACGTCCCGACATGGAGTGTGTTATATCCATGTTAACCAGTCAACAAGGTCGTAGTGAGATGTTAATTCGCAAACCAGGAATCTATGGTTATAGATGGTATCACTCAGGCAGCCTTTCTGCATTTGGAGAAGCAACACAATATTACAGTGTTCAGTCTAAAGCACAAGTCCCACTAGTGGATGACGACCAAAGCCAGTGTAGTGCTTTTTCAAATTCAAGTGAATTTACGTTAGATGACGGAGATCTATTAAGTCAGAGCTGA 1695 0.4147 MLSTFWQGEGRKGPYLEILGALDCKSFSYETLASATQNFRPGNKFHEDGFGMLEDGTEIAVGKPNPREGDQRKDLSQIQWLSRLHHPNVEKFYGYCAHNNQLLFVYKYYPDCLGELLNKQLDWRQRLNYLHSGSRNGIILHSDIKPDNIWLDQEWNPLIGDFYFGRQILEDETSAHELFKEGKISEIVDLILAYSMYREQAENCVKISILCVQLNPNSRPRMEDVVFMLAGTLGHIETPIFPHDDEFEEAVGVGEEFSYDVPMEEHSNSFTVHPQDDHEAQHENFEEKIAAQNCQKFSYETLYDATNKFASQNVLGRGGFGLIYKGKLNNGREIAVKKSLTMSKELRKALIREVDLLSRVKHPNVVKLIGYCTDNSELLIVSEGYIAPEYLDNGHVSVKTDVYSFGVLMLELISGKRVSSMPPPEDNAISLLDWAYKLFKTGRILEFMDRALADSEMVEQVKNCIIIGLLCAQGDPKLRPDMECVISMLTSQQGRSEMLIRKPGIYGYRWYHSGSLSAFGEATQYYSVQSKAQVPLVDDDQSQCSAFSNSSEFTLDDGDLLSQS 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2408 564 ProSiteProfiles Protein kinase domain profile. 16 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2408 564 Gene3D Phosphorylase Kinase; domain 1 270 382 - -
Bisa01g2408 564 Pfam Protein tyrosine and serine/threonine kinase 385 488 IPR001245 GO:0004672|GO:0006468
Bisa01g2408 564 Pfam Protein tyrosine and serine/threonine kinase 312 383 IPR001245 GO:0004672|GO:0006468
Bisa01g2408 564 SMART serkin_6 309 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2408 564 ProSitePatterns Protein kinases ATP-binding region signature. 315 338 IPR017441 GO:0005524
Bisa01g2408 564 Coils Coil 275 295 - -
Bisa01g2408 564 SUPERFAMILY Protein kinase-like (PK-like) 294 494 IPR011009 -
Bisa01g2408 564 Gene3D Transferase(Phosphotransferase) domain 1 383 496 - -
Bisa01g2408 564 Gene3D Transferase(Phosphotransferase) domain 1 114 240 - -
Bisa01g2408 564 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 284 381 - -
Bisa01g2408 564 SUPERFAMILY Protein kinase-like (PK-like) 33 233 IPR011009 -
Bisa01g2408 564 Pfam Protein kinase domain 65 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2408 564 Gene3D Phosphorylase Kinase; domain 1 17 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2408 Bisa-ChrBisa01 45075485 45089898 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2408 287 506 Receptor kinase-like Gene Family AT4G23280 27.863 1.78e-26 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g2408 Pkinase 3.1e-08 CL0016