Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2400 ATGTCACGGCTCGCGACGGGTTGGAAGAGCAGAAGTCGTGCCGCGGCTCGTGTTCAAGGTGGAGCAGAAGGTGTCGCGGCTCCCTTCAATGCTTCTTAGGGACGCAAAGATCAAGATTTGGAAACCTTAGCTGTCCTGGGCTGCAAGTTCTTTTCCTTTGAGACCTTAGCTTCTGCTACTCACAACTTTCGTCCTGAAAATAAGTTTCATGAAGATTACTCTGGATCCATGTTCAAGGCAAGATCTTTAACCTGTTTTACCTATTGTTTATGTTTGGGAATATTGAAGGATGGGACAGAGATTGCCGTGAAGAAGTTATATGCATGGCGAAAGACTAAGGAGTTCTCGACAGAGATAGTATGCGGATATATAGCTCCAGATTATTTGATGAATGGACGTGCATCAGCAAAGACAGACATGTATAGTTTTGGGGTTACGATGCTAGAGCTCATCAGTGGCAAAAAAGCCATCAATTATGAGCTACAAGAGGCGGGACTCCTAGTTGGTTGGGCAAAAGAACTTTTCAAGAAAGGCAAGATCTTAGAGATTGTAGACCCTGTCTTAGCAGATTCGGTAATAAGAGAGCAAGTGGAAAACTGCGTTAAAATAAGTTTATTGTGCACTCAGTTGAATCCAAATTCACGTCCCCAAATGGAGGATGTTGCATCCATGCTAGCAGGGAAATGGGGCCATATAGAGACACCAGTTTTTCCTCATGATGATGAATTTGAAGAAGCAATTCGCGTTGGGGAAGAATTTTCTTATGATGTGTCAATGGAGGAGCATAGTAACAAATTCACAGTTCATGCCCAAGATGACCATGAGGCACAACATGAAAATTTTGAGAAAAAAATAGCTGCGCAGAATTGTCAAAAGTTTTCCTATGAAACCTTGTATGATGCTACCAACAAATTTGCTTCCCAAAATGTGATAGGTCGTGGCGGCTTTGGACTCGTCTACAAGGGGAAGTTGGACAACGGGAGAGAGATTGCTGTGAAGAAGTCATCAACAATGTCAGCACAATTGAGGAAAGCATTGATGAAGGAGGTAGATTTGCTAAGTAGAGTGAAGCACCCCAATGTGGTGAAATTGGTTGGTTATTGCACCGATAACAATGAACTTTTACTTGTTTCTGAGTATGTTCCTAACAAGAGTCTTGACAAGTTTTTGTTTGGTCCCAACAGAAGGGAGAATCTTAATTGGAGACAGACATACGGCATAATCATAGGCATTGCAAAAGGTTTGAGTTATCTCCATGATGATTCTCAAAATTGCATCATTCACCGTGACATAAAGGCCGGTAATATATTGATTGATCACAAATGGGTGCCCAAAATTGCTGACTTTGGCATTAGTCGTCTTTTCGATGAAGATCAAACCCATGTCTACACCGGTGCAATTGGGACTTGGGGATATATTGCCCCAGAGTATTTGGATCATGGACATGTGTCAGTGAAGACAGACGTATACAGTTTTGGGGTTTTGGCATTAGAACTTATCAGTGGCAAAAAATTCTCATTTATGCCACCGCAAGAGGACAATGCTATAAGCCTACTTGATTGGGCATACAAACTTTTCAAGACAGGTAGGATATTAGAGATCATGGATAGAGCTTTAGCAGATTCGGCAGTGGTGGAACAAGTGAAAAACTGCATCATAATAGGTTTATTATGTGCTCAAGGTGACCCAAAGTCACGTCCCGACATGGAATATGTTATATCCATGTTAACAGGTCAACCAGGCCGTAGAGAAATGTTAATTCGTAGACCAGGAATCTATGGTTACAGAGGATATCACTCAAGCAGAATTTTTGCATTTGGAGGAGCAAAACAATATTACAGTGTTCAGTTTGAAGCACAAGTCCCATTAGTGGATGAGGATCAAAGCCAGGGTAGTGCTTCTTCAAATTCCAGTGAATTTATGTTAGAAGATCCCCATACCAACCCCAACACAATTCTTGCCCAAGATGATAGTGATCTGTTAAATCAGAGTTGA 1995 0.417 MSRLATGWKSRSRAAARVQGGAEGVAAPFNASXGRKDQDLETLAVLGCKFFSFETLASATHNFRPENKFHEDYSGSMFKARSLTCFTYCLCLGILKDGTEIAVKKLYAWRKTKEFSTEIVCGYIAPDYLMNGRASAKTDMYSFGVTMLELISGKKAINYELQEAGLLVGWAKELFKKGKILEIVDPVLADSVIREQVENCVKISLLCTQLNPNSRPQMEDVASMLAGKWGHIETPVFPHDDEFEEAIRVGEEFSYDVSMEEHSNKFTVHAQDDHEAQHENFEKKIAAQNCQKFSYETLYDATNKFASQNVIGRGGFGLVYKGKLDNGREIAVKKSSTMSAQLRKALMKEVDLLSRVKHPNVVKLVGYCTDNNELLLVSEYVPNKSLDKFLFGPNRRENLNWRQTYGIIIGIAKGLSYLHDDSQNCIIHRDIKAGNILIDHKWVPKIADFGISRLFDEDQTHVYTGAIGTWGYIAPEYLDHGHVSVKTDVYSFGVLALELISGKKFSFMPPQEDNAISLLDWAYKLFKTGRILEIMDRALADSAVVEQVKNCIIIGLLCAQGDPKSRPDMEYVISMLTGQPGRREMLIRRPGIYGYRGYHSSRIFAFGGAKQYYSVQFEAQVPLVDEDQSQGSASSNSSEFMLEDPHTNPNTILAQDDSDLLNQS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2400 664 CDD STKc_IRAK 311 578 - -
Bisa01g2400 664 ProSiteProfiles Protein kinase domain profile. 305 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2400 664 Pfam Protein tyrosine and serine/threonine kinase 112 224 IPR001245 GO:0004672|GO:0006468
Bisa01g2400 664 SUPERFAMILY Protein kinase-like (PK-like) 285 576 IPR011009 -
Bisa01g2400 664 ProSitePatterns Protein kinases ATP-binding region signature. 311 334 IPR017441 GO:0005524
Bisa01g2400 664 Coils Coil 271 291 - -
Bisa01g2400 664 SMART serkin_6 305 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2400 664 Gene3D Transferase(Phosphotransferase) domain 1 102 233 - -
Bisa01g2400 664 Gene3D Transferase(Phosphotransferase) domain 1 381 585 - -
Bisa01g2400 664 FunFam cysteine-rich receptor-like protein kinase 10 381 581 - -
Bisa01g2400 664 Gene3D Phosphorylase Kinase; domain 1 264 380 - -
Bisa01g2400 664 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Bisa01g2400 664 Pfam Protein kinase domain 307 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2400 664 FunFam receptor-like protein kinase FERONIA 268 380 - -
Bisa01g2400 664 MobiDBLite consensus disorder prediction 626 664 - -
Bisa01g2400 664 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 278 626 - -
Bisa01g2400 664 SUPERFAMILY Protein kinase-like (PK-like) 121 234 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2400 Bisa-ChrBisa01 44859050 44865931 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2400 284 577 Receptor kinase-like Gene Family AT4G11530 48.136 9.07e-87 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bisa01g2400 Pkinase 1.4e-49 CL0016