LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g2397	ATGAGCAAATCGCACGCAAATTCTAACATCGGAGGGCTTTTTCTTTACCTTTTTATTTTGGATTCCCGATTTACCCTAGGCCAGACCGCTCATCCTCTTAAAACGGAAGGAGAGAATTTTAAATATCTGCAGGTGAAACTCTTTGTTTCTTCATCATACTCGGTTTTTCAGCCGCCGGCTGCAATTCTCGTTTTCCCGGAAAATCAATTTCGGAGGAGACAGAGGTTACCACTCTGCTCAGGAGGATTCCTCTGTTTTTTGTTGCATGGGCTGGTTTGGGGAACCATAAACACTATGAACAAATCTAACAGTTTTCTTCACAATCTCATGAAAACCTTCAAATTCGGTTCCAGTAGAGAGGCAAGCAGCGAAGAACAGTTGGAGAGAATTGCTGCCCAGGAGCAGAAGATCTTTCCTTATGAAACTTTGCTTGCGGCGACGAAAAATTTTCACGCTCATCATAAACTTGGTGAGGGAGGATTTGGACCCGTCTACAAGGGAAAATTGGATGATGGAAGAGAGATTGCAGTGAAGAAGTTATCACAAAGCTCAAATCAAGGGAACAAAGAGTTCATGAACGAGGCCAAGTTGTTGTCTCGTGTGCAGCACCGGAATGTGGTGAATTTGTTGGGGTATTGTGTCCATAGCACAGAGAAGCTCCTTGTGTATGAGTATGTTTCTAATGAGAGCCTTGACAAGCTTCTATTCAAATCACACAAGAGAGAGCAGCTAGATTGGAAACGAAGGCTTGACATAATCACAGGGGTAGCGAGGGGGTTGCTTTATCTTCATGAAGATTCACACATCTGCATCATCCACAGAGACATCAAGGCCAGTAACATCTTGCTTGATGATAAATGGATGCCCAAAATTGCAGACTTTGGCATGGCTCGTCTCTTTCCTGAGGACCAAACCCATGTCAATACGCGTGTGGCTGGCACCAACGGATATATGGCTCCAGAGTATGTGATGCATGGGCATCTATCAGCCAAAGCAGATGTTTTTAGCTATGGGGTTTTGGTGTTGGAGCTGATTAGTGGCCAAAGAAACTCATCCTTTAACCCTGACGTGGATGCTAATAGTCTCCTTGATTGGGCGTATAAGCTTTACAAGAAAGGGAAGAGCTTAGAAATAGTGGACCCTTACCTAGCAGCTTCAGCTGTGACAGAACAAGTAGCGATGTGCATACAGCTAGGTCTGCTTTGCACCCAAGGGGACCCGCAGCTCCGGCCGAGCATGCGGCGGGTGGTGGTGACGCTGAACAGGAAGTCGGGTCACATGGAGGAGCCGACGAGGCCGGGAGTGCCTGGTTCCAGGTACAGAAGACATCGCAGGCCCTCTGCATTGTCTTCCACAGCTGGTACTTCCGGTGCTGACTCTGATTCACGGACTTCGGATTCAAGCATTAATTATACTTCCACTGCATCAGCAGGGACAAGCTCCGCTGCTCCAGAAGTTGACCCTCGCGGAAAACGTCCCATGCACTAG	1488	0.4718	MSKSHANSNIGGLFLYLFILDSRFTLGQTAHPLKTEGENFKYLQVKLFVSSSYSVFQPPAAILVFPENQFRRRQRLPLCSGGFLCFLLHGLVWGTINTMNKSNSFLHNLMKTFKFGSSREASSEEQLERIAAQEQKIFPYETLLAATKNFHAHHKLGEGGFGPVYKGKLDDGREIAVKKLSQSSNQGNKEFMNEAKLLSRVQHRNVVNLLGYCVHSTEKLLVYEYVSNESLDKLLFKSHKREQLDWKRRLDIITGVARGLLYLHEDSHICIIHRDIKASNILLDDKWMPKIADFGMARLFPEDQTHVNTRVAGTNGYMAPEYVMHGHLSAKADVFSYGVLVLELISGQRNSSFNPDVDANSLLDWAYKLYKKGKSLEIVDPYLAASAVTEQVAMCIQLGLLCTQGDPQLRPSMRRVVVTLNRKSGHMEEPTRPGVPGSRYRRHRRPSALSSTAGTSGADSDSRTSDSSINYTSTASAGTSSAAPEVDPRGKRPMH	495

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g2397	495	SUPERFAMILY	Protein kinase-like (PK-like)	135	421	IPR011009	-
	Bisa01g2397	495	FunFam	Cysteine-rich receptor-like protein kinase 10	114	225	-	-
	Bisa01g2397	495	CDD	STKc_IRAK	156	422	-	-
	Bisa01g2397	495	SMART	serkin_6	150	418	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa01g2397	495	FunFam	Cysteine-rich receptor-like protein kinase 10	227	432	-	-
	Bisa01g2397	495	PANTHER	PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA	100	470	-	-
	Bisa01g2397	495	Pfam	Protein tyrosine and serine/threonine kinase	151	419	IPR001245	GO:0004672\|GO:0006468
	Bisa01g2397	495	MobiDBLite	consensus disorder prediction	448	481	-	-
	Bisa01g2397	495	MobiDBLite	consensus disorder prediction	420	495	-	-
	Bisa01g2397	495	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	271	283	IPR008271	GO:0004672\|GO:0006468
	Bisa01g2397	495	Gene3D	Transferase(Phosphotransferase) domain 1	226	432	-	-
	Bisa01g2397	495	Gene3D	Phosphorylase Kinase; domain 1	111	225	-	-
	Bisa01g2397	495	ProSiteProfiles	Protein kinase domain profile.	150	429	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g2397	Bisa-ChrBisa01	44773156	44779969	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g2397	118	434	Receptor kinase-like Gene Family	AT4G11530	49.843	4.12e-107	332

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Bisa01g2397		Pkinase	8.2e-51	CL0016