Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2394 ATGAACATGGACAATCTTGTCTTCAAGTTCAACTATTCCATTGCTTATTACATCTTTCTAATATACTCTCTCACCGTCATGCATTCTACTCTAGCTTCCTTATCATGCCTCCAAACTCCATACCCTCATGTATGTAACCACTACATGACCACCAATACACTATCATCATCATCTTCTTCTTCTTTCCATGATATGGCTCTTAAGGTCACCATGGACCAAGCCATTGAGGCTCACAAGCTTGTCTCGACCATGAAACTGGACAATGACTTATTCAAAGACAAGCGAGCCAAGTTGGCCTGGACCGACTGCCTAGAGCTGTACGAGGACACGGTGTACCAGCTGAACCGGTCTGTTTCGGGCTCGAAAAAACCGGACGACAGGCTCACGTGGCTCAGTGCCTCCATTGCCAACCACCAAACCTGCCAAAACGGCTTCCTCGACTTCAACCTTCGTTCTCATCTCAACCACTTCCCTAACTTCCTAACCAACTTCTCCAAATTAATAAGCAATTCGTTAGCCATCACTCAAGCCTTATCAGCATCAACATCATCATTGTCATCTATGAAAAAAGTTGATAATGGTGGGAGAAAGTTGTTGTATGATAATGGTTTTCCTGAGTGGGTTTCGAGCTCAGATCGGAAGCTTCTAGAGGGGGCGGCGCCCGGGGCGGATGTTGTGGTGGCAAAAGATGGGAGTGGGAACTATAAAACGATAGCAGAGGGTGTGGCTGCAGCCGTCCGTATGAGTGGCGGCGGAGGTAAGAGAGTGGTGGTGCAAGTGAGGAAGGGAGTGTATGAAGAGAACGTGGACATTAAGAGCACAATGAAGAACTTGATGATCGTTGGAGATGGAACTGATGCTACTATTGTTACGGGTGGCAAGAATGCTGGAGAAACCACCACTTTTGGCTCTGCTACTTTTGCTGTTTCTGGTGACAACTTCATCGCCCGAGACATCACCTTTGAGAACACCGCCGGACCAGCCAAGCACCAGGCGGTGGCTCTGCGCTCCGGCGCCGACCACTCGGTGTTCTACCGGTGCAGCTTCAAGGGGTACCAAGACACCTTATACGTCTACTCTCAGCGTCAATTCTACCGTGACTGCGATATCTATGGTACCATAGACTTCATCTTCGGCGACGCTGCCGCCGTCATCCAGAACTCCAACATCTACGTAAGGAAGCCGATGAGCAACCAGCAGAACTTCGTGACGGCGCAGGCGAGGACCGATCCCAACGAGAACACCGGCATTATCATCCACAGCTGCCGCGTGACGGCGGCGTCGGACTTGAAGCCGGTGCAGGGCTCGTTCAAGACCTTCCTGGGCCGGCCGTGGAAGCAATACTCCCGGACGGTGGTGATGAAGACCGCCCTCGATGGCGGGCTCATTGACCCGGCCGGGTGGGCGCCATGGTCTGGGAACTTTGCTCTGAGCACTCTATATTATGGCGAGTACATGAATACAGGGTCCGGTGCCGCCACCGGTGGCCGAGTGAAGTGGCCGGGGTTTCATGTGATCACTAATCCGTCGGAGGCCAGTAAGTTTACGGTGGGCAATTTCTTGGACGGAGACTCGTGGATTCCCTCCTCTGGCGTGCCGTTTGACGCCGGGTTGTGA 1617 0.5207 MNMDNLVFKFNYSIAYYIFLIYSLTVMHSTLASLSCLQTPYPHVCNHYMTTNTLSSSSSSSFHDMALKVTMDQAIEAHKLVSTMKLDNDLFKDKRAKLAWTDCLELYEDTVYQLNRSVSGSKKPDDRLTWLSASIANHQTCQNGFLDFNLRSHLNHFPNFLTNFSKLISNSLAITQALSASTSSLSSMKKVDNGGRKLLYDNGFPEWVSSSDRKLLEGAAPGADVVVAKDGSGNYKTIAEGVAAAVRMSGGGGKRVVVQVRKGVYEENVDIKSTMKNLMIVGDGTDATIVTGGKNAGETTTFGSATFAVSGDNFIARDITFENTAGPAKHQAVALRSGADHSVFYRCSFKGYQDTLYVYSQRQFYRDCDIYGTIDFIFGDAAAVIQNSNIYVRKPMSNQQNFVTAQARTDPNENTGIIIHSCRVTAASDLKPVQGSFKTFLGRPWKQYSRTVVMKTALDGGLIDPAGWAPWSGNFALSTLYYGEYMNTGSGAATGGRVKWPGFHVITNPSEASKFTVGNFLDGDSWIPSSGVPFDAGL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2394 538 Pfam Plant invertase/pectin methylesterase inhibitor 35 174 IPR006501 GO:0004857
Bisa01g2394 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 180 IPR035513 -
Bisa01g2394 538 PANTHER PECTINESTERASE 27 528 - -
Bisa01g2394 538 Gene3D - 220 538 IPR012334 -
Bisa01g2394 538 CDD PMEI-like_3 34 174 - -
Bisa01g2394 538 FunFam Pectinesterase 219 538 - -
Bisa01g2394 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 178 IPR035513 -
Bisa01g2394 538 SUPERFAMILY Pectin lyase-like 219 537 IPR011050 -
Bisa01g2394 538 SMART PMEI_2 27 174 IPR006501 GO:0004857
Bisa01g2394 538 ProSitePatterns Pectinesterase signature 2. 370 379 IPR033131 -
Bisa01g2394 538 NCBIfam pectinesterase inhibitor domain 12 178 IPR006501 GO:0004857
Bisa01g2394 538 Pfam Pectinesterase 224 524 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2394 Bisa-ChrBisa01 44718522 44720823 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2394 18 538 Carbohydrate Esterase AT1G23200 53.734 0.0 546