Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2385 ATGGAGAGAGATTTCATGGGTCTAAGCTCGAAAGAATCACTGGCTGTTGTGAAGGACGAGCTTAACAATGATGGATGCAAAGACTCAGGCTTCAGTAAGGGTTCAGTTGTGCAATGGCCGTTCTCGAATAAAGTCTCCGCTATCCCACATTTGATGTCTTTCAAGGTTTCTCAAGATGAGAAGACTAAGAACATGATGTCTGATCCCATGACATCTGCTGGGTTTATGGCTATCTCAAGTCCCGATGCATTTGATGCTACTAAAAAACGCTCTGCTGGTGAAATCCAGAAACCCTTCAATCTCGATGGGCAAGGTGGCTTTCATGTTTCCCTCTCTCCGTATCCTGTACAACATGATGTGCATTCTCTGAATCGTCCTCATGATGTGAAGATGTTTTCAGTTCCAAATCAAGCAATTTCAGTTTCCATGGGGCACCCTTTCTTGAAGAACCATTTCACCCCTGCAGGTCAGAAGATGGCGAGCGCTAATGTGAAGCAACAGCTGCTTGGGGGTATACCTGTTACCTTGCCTCATTCAGTACCTCCCACCATTAGTTCTGTTGCTGGTCTGACTGAATCATGTGTCAAGCCATCTGCACCATCTGCTCAACTTACCATCTTCTATGCTGGTACTGTGAATGTCTTTGATGATATCACCCCTGAGAAGGCACAAGCGATCATGTTGTTGGCTGGGAATGGATTACCTGTGGCTTCTAACAAGGCACAGCCAAAAGTTCAGGCACCGAATCTGAAGTTGACTGCTGGTGAAGGTGTGCCTGTGAGTCAACCGATAAATATATCGCCTGGCTCTGGTCTTTCAAGTCCTTTATCTCTTTCTTCGCATACTGGTGCACAGTCAGGGAGTGGATCTACTAGCACTGATGAATTCGTGGCAGCTAAAACAACTGGAATTTCCACTACTCCTGTTAGCAAAGTGGAGCCTCCGAAAGTAGTCAATGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGTAAAGCATCCTTGGCTCGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAATGCAGGACCATATAACCCAAGCAAGAAATCCGAAGAGTGTGCTACTGCAGAATACAATGGTGCTAACTTCTCTGCAACTGCTTCTGCTGGTTCTAGTGTTCTGTCAGCCAAGCAAGGATTGTAA 1170 0.4615 MERDFMGLSSKESLAVVKDELNNDGCKDSGFSKGSVVQWPFSNKVSAIPHLMSFKVSQDEKTKNMMSDPMTSAGFMAISSPDAFDATKKRSAGEIQKPFNLDGQGGFHVSLSPYPVQHDVHSLNRPHDVKMFSVPNQAISVSMGHPFLKNHFTPAGQKMASANVKQQLLGGIPVTLPHSVPPTISSVAGLTESCVKPSAPSAQLTIFYAGTVNVFDDITPEKAQAIMLLAGNGLPVASNKAQPKVQAPNLKLTAGEGVPVSQPINISPGSGLSSPLSLSSHTGAQSGSGSTSTDEFVAAKTTGISTTPVSKVEPPKVVNATAMLPSAVPQARKASLARFLEKRKERVMNAGPYNPSKKSEECATAEYNGANFSATASAGSSVLSAKQGL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2385 389 SMART tify_2 197 232 IPR010399 -
Bisa01g2385 389 MobiDBLite consensus disorder prediction 261 295 - -
Bisa01g2385 389 MobiDBLite consensus disorder prediction 263 295 - -
Bisa01g2385 389 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 131 364 IPR040390 -
Bisa01g2385 389 Pfam tify domain 199 231 IPR010399 -
Bisa01g2385 389 Pfam Jas motif 329 353 IPR018467 -
Bisa01g2385 389 ProSiteProfiles Tify domain profile. 197 232 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2385 Bisa-ChrBisa01 44389936 44393112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2385 37 362 Tify Gene Family AT3G17860 35.015 3.31e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bisa01g2385 tify 1.8e-18 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2385 01 44389936 44393112 Bisa01g2385 01 44389936 44393112 ECH