Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2382 ATGGACGATATGAAGGGTAAGTTCAAGGGATTCATGAAGAAAGTATCGCAATCACCGTCTGGTAAATTCAAGGGCCAAGGAAGAGTCTTAGGATCGTCCACATCCCCGACCTCAGCCCCATCATCATCCTCGGCGTCTAGTAATTCTAGTCTTCTCCGCCCTCCGCAGAGTCCTGTTTCAAAACCAAGTCAAGCAGCGGCGAATCCTCGACCGCTTGTCCAGAGAACGAATTCTGTGCCGACTAGAACGGAAGGATCGAGCAGGTCCAATCCTGATCGCAAACCGCAAGACGGGTTTGACCCTTTCGATTCGTTAATAACTTCTGGGAAGAGATCTACAACTGGGTATTCATTGGATGTGTATGAATGTCCTGTTTGTGGGCAATCGTTTAGGTCCGAAGAAGAGGTGACTTTACATGTTGAAAGTTGTCTGAATAACCCAGTTGAGCGTAATGAGCGTAATGATGAAAATGAACATGGAAATGGTGTTTCAGAATTGCCTACCAATGAAGTTGAGTCGAAAGGTGAGTTGGAGGTTTCCCTTGGTACTTATATATCAGCGAAGCCATCCGAAGGTTCAGCTGAAATTCTTCTCAAATTGTTGAGGAATATTGTAAAGGAACCAGAGAATGCAAAGTTTAGGAAAATTAGGATGAGTAATCCAAAGATAAAAGAGGCTGTTGGTGAGGTTGCAGGGGGAATTGAGTTACTGAGTTGTGTAGGATTTGAGCTGAAGGAGGAGGATGGGGACACATGGGCAATGATGGAAGTTCCTATGGAGGAGCAAATAAAATTGATTAAGAAAGCAATAGCATTACTGGAATCATCTCAAAAGAAAGAAAACTCGGAATCTGGAACTTTGGCAGAAACAGATGTAAAGGCAGAACCTATGAAAATCGACAGACAGGTAAAGGTCTTCTTTGCTGTATCAGAAAGCATCGCAGCTAAAATTGAGCTGCCAGATTCTTTCTATAACCTTTCGATTGATGAGGTGAAAAGAGAAGCTGAATTGAGGAGAAAAAAGATTGCAGATTCTCAGCTTTTAATCCCTAAGTCACTTAAAGAAAAGCAAGCAAAAGCCGGCAAGAGAAGATACAGAAAAACTATGATTCGGATTCAGTTTCTGGATGGAACGGTGCTTCAAGGTGTGTTTAATCCATGGGAGCCAACAACTAATCTATATGAGTTTGCCGCCTCCGCATTAAAAGTACCAGGTTTAGAATTTGACCTAATGCACCCTGTACTTGTTCAACGGCGGGTTATCCCTCATTTTCCCAAATCGGGAGAGAAAGCTAGAACACTAGAGGAAGAGGACCTGGTACCTTCAGCTCTAGTGAAGTTCAGACCTCATGAAACAGATTCTGTGGTTTTCACAGGTCTCAAAAATGAATTGCTTGAAATGAGTGAACCGCTTACGTAA 1419 0.4299 MDDMKGKFKGFMKKVSQSPSGKFKGQGRVLGSSTSPTSAPSSSSASSNSSLLRPPQSPVSKPSQAAANPRPLVQRTNSVPTRTEGSSRSNPDRKPQDGFDPFDSLITSGKRSTTGYSLDVYECPVCGQSFRSEEEVTLHVESCLNNPVERNERNDENEHGNGVSELPTNEVESKGELEVSLGTYISAKPSEGSAEILLKLLRNIVKEPENAKFRKIRMSNPKIKEAVGEVAGGIELLSCVGFELKEEDGDTWAMMEVPMEEQIKLIKKAIALLESSQKKENSESGTLAETDVKAEPMKIDRQVKVFFAVSESIAAKIELPDSFYNLSIDEVKREAELRRKKIADSQLLIPKSLKEKQAKAGKRRYRKTMIRIQFLDGTVLQGVFNPWEPTTNLYEFAASALKVPGLEFDLMHPVLVQRRVIPHFPKSGEKARTLEEEDLVPSALVKFRPHETDSVVFTGLKNELLEMSEPLT 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2382 472 Gene3D - 357 449 - -
Bisa01g2382 472 ProSiteProfiles Zinc finger C2H2 type domain profile. 121 154 IPR013087 -
Bisa01g2382 472 MobiDBLite consensus disorder prediction 1 111 - -
Bisa01g2382 472 MobiDBLite consensus disorder prediction 19 86 - -
Bisa01g2382 472 Gene3D - 184 275 - -
Bisa01g2382 472 FunFam UBX domain-containing protein 6 357 448 - -
Bisa01g2382 472 CDD PUB 181 275 - -
Bisa01g2382 472 Gene3D Classic Zinc Finger 118 148 - -
Bisa01g2382 472 SUPERFAMILY Ubiquitin-like 335 447 IPR029071 -
Bisa01g2382 472 SMART PGNneu 192 259 - -
Bisa01g2382 472 MobiDBLite consensus disorder prediction 149 173 - -
Bisa01g2382 472 ProSiteProfiles UBX domain profile. 363 447 IPR001012 GO:0005515
Bisa01g2382 472 Pfam PUB domain 191 266 IPR018997 -
Bisa01g2382 472 SUPERFAMILY PUG domain-like 189 275 IPR036339 -
Bisa01g2382 472 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 472 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2382 1 395 C2H2 Transcription Factor Family AT2G01650 54.863 2.96e-141 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g2382 PUB 1.8e-19 No_clan