Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2369 ATGGCTTCTCATTCTCATCTGTCAAATGCTGTCTACTTCTTCAAGATTATTCTTCAATCTTCTCTTGGAAAGCTTGGAGCTTCTCATCTTGAGGTCAACATACTTGACAAGAGTTGTCTAGAAATAGAATATCCTTCTCATGGAAACCTCGAACAGAACAACGATGATGATTCTAATTCAAATTCAGTAGAATTCTTGAATGAGGTGCCTCCTCTTCCTAAGCAGAAAAAAAGATCCAGAGAAGCTGAAAGAACCTTCAATATGCAAATCATTCATCATGGTGAAGGGATAAAGCTTGAAAAGTCAACCAAATTGAAAGTAAGTTTTATCCTTAATCTTGCTTGTTCATGGACTGATCTAAGTTTCACAGAAGGCACTAAAAATTACCGAAAATGCAAGGCAGTTAAAGGAGAGGAGAAACCATTGACTTGTGCTGAAAAGGCCAAAGCTATAGAGAGAGTCAGTACTTTCATGTCTAAGAACCCCTTTTTCAAAATTGCCATACAGCCAGCATACATCAGAAGTTGCTTGAGCGTACCAGCAAATTTTGTTGAACAGCATCTGAAGAAGAAGATGAAGAAGGGGGGAGGAGCTGCCATCCTCCGGGTTTCAGATGGAAGAACTTGGCATGCTAAGTACAGAGTTTGCGAAATAACAAAGAAACCAAAGGTCAAAATCAGTTCAGGGTGGTACTCATTTGCGAAAGACAATCACCTAAAAGTGGGTGATGTTTGTGTCTTTGAGCTCACGAACAACGTTGACATCTCATTCCTGGTTCATGTTTTTGGAGATTCTAAGAATCCAAGTTGCTCACATTTTGCAGCACTAAAATACAAGAAAATGGGCTCCCGGTTTACGGCTCCAAGAGGCTTCAAGGTTTTCCTGCAAGATCTTGGAGAGGGTAGGAGAGTTGTGACACGCGCTGTGTGGAGAGACTTCAGGGAGGCCGTTAACGCAGCAGAGAAGAGACGAGACCAATCTTTCATTATCAGATTTGAGCTCCGAGAACCTCCGAGGTTCTTTTGGAAGTTACTGGAGAGGGCAGAAGAGTCATGA 1056 0.4167 MASHSHLSNAVYFFKIILQSSLGKLGASHLEVNILDKSCLEIEYPSHGNLEQNNDDDSNSNSVEFLNEVPPLPKQKKRSREAERTFNMQIIHHGEGIKLEKSTKLKVSFILNLACSWTDLSFTEGTKNYRKCKAVKGEEKPLTCAEKAKAIERVSTFMSKNPFFKIAIQPAYIRSCLSVPANFVEQHLKKKMKKGGGAAILRVSDGRTWHAKYRVCEITKKPKVKISSGWYSFAKDNHLKVGDVCVFELTNNVDISFLVHVFGDSKNPSCSHFAALKYKKMGSRFTAPRGFKVFLQDLGEGRRVVTRAVWRDFREAVNAAEKRRDQSFIIRFELREPPRFFWKLLERAEES 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2369 351 SMART B3_2 163 265 IPR003340 GO:0003677
Bisa01g2369 351 MobiDBLite consensus disorder prediction 46 80 - -
Bisa01g2369 351 Pfam B3 DNA binding domain 163 262 IPR003340 GO:0003677
Bisa01g2369 351 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 29 270 IPR044837 -
Bisa01g2369 351 CDD B3_DNA 162 262 IPR003340 GO:0003677
Bisa01g2369 351 MobiDBLite consensus disorder prediction 47 66 - -
Bisa01g2369 351 Gene3D - 142 265 IPR015300 -
Bisa01g2369 351 ProSiteProfiles B3 DNA-binding domain profile. 162 265 IPR003340 GO:0003677
Bisa01g2369 351 SUPERFAMILY DNA-binding pseudobarrel domain 159 263 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2369 Bisa-ChrBisa01 43934018 43938434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2369 142 262 REM Transcription Factor Family AT1G49480 31.452 3.56e-15 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bisa01g2369 B3 1.7e-18 CL0405