Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2361 ATGGTTTCAAGATCTTATACAAACCTATTGGACCTAGCATCTGGCGACGCTCCATCGTTTGGGTGCATAAACCGTGGAATTCCTCGGGTTATGACCGTGCCTGGTCTGATTTCCGAGGTTGATGACGACCCAGTGGAGAGCGTGAGCTCCGATCCCTCGTCATCGGCGTCGGCCCACCGGGACCGGATCATAATCGTGGCGAACCAACTCCCAATTAGGCTTCAGAGGCGGCCGGATTGTAGTAGTAGTGGTGGTAATGCTAGGAATTGGGTTTTCAGTTGGGATGAGAATTCACTTCTTCTCCAATTGAAAGATGGGTTCGGTGATGATGATATTGAGGTTATCTATGTTGGTTGCCTGAAGGAAGAAATCCACCCAAATGAACAAGACGAGGTCTCACAGATCCTTCTAGAAACTTTCAAATGTGTCCCCACTTTTCTTCCCCCTGATCTGTTCTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTCTGTTTCACTACATGCTTCCTTTGTCCCCAGACCTTGGTGGTAGGTTTAACAGGTCGCTATGGCAGGCTTACGTGTCTGTTAACAAGATTTTCGCTGATCGAATCATGGAAGTGATTAACCCGGAAGACGATTACGTTTGGATCCATGATTATCATCTCATGGTGTTGCCAACATTCTTGAGGAAGAGGTTTAACAGAGTGAAACTTGGGTTTTTCCTGCATAGTCCATTCCCCTCTTCAGAAATCTACAAGACATTGCCTATTAGGGAGGAGCTATTGAGAGCCCTTTTGAATAGCGATCTGATCGGGTTCCACACTTTTGATTATGCGCGGCATTTCCTCTCTTGTTGCGGCCGGATGCTGGGTTTAAGCTATGAATCGAAACGGGGTTACATCGGGCTTGAGTACTATGGTAGGACTGTGAGCATCAAAATTCTTCCTGTTGGGATCCACATGGGTCAGCTTCAATCAGTGTTGAGTCTTACTAAGACTGAAGAGAAGGTTGGTGAGCTGATTAGGAAGTTTTCGGATCGAGGCAGGACAATGCTGCTTGGTGTGGATGACATGGATATCTTTAAGGGAATAAGTTTGAAGCTTTTGGCAATGGAGCAGCTTTTGATTCAGCATCCTGAGTGGCAAGGGAAGGTTGTGTTGGTTCAGATTGCTAACCCTGCCCGGGGGCGAGGGAAGGATGTGAAGGAAGTGCAGGCTGAGACGAAGGCGACGGTTAAGAGGATTAATGAAACATTTGGGACACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCATTGAAGTTTTATGAGAAAGTTGCGTACTATGTCGTGGCTGAGTGTTGTCTAGTCACCGCGGTTAGGGATGGAATGAATCTCATACCCTATGAATACATAATTAGCCGTCAAGGAAATGAAAAATTGGACAAAGTTTTGGGACTAGCTTCCTCCCCCAAGAAGAGCATGTTGGTTGTCTCTGAGTTCATAGGTTGTTCCCCATCTTTAAGCGGAGCAATTAGGGTGAACCCGTGGAACATCGATGCAGTAGCGGATGCAATGGACTCTGCCTTGGAAATGGCTGATTGGGAGAAACAACTTAGGCATGAGAAGCATTATAGATATGTTAGTACCCACCACGTCGGGTATTGGGCTCGTAGCTTCTTGCAGGATTTGGAAAGGACTTGTGGTGATCATGTCCGGCGAAGGTGGTGGGGAATTGGATTTGGATTGAGTTTCAGAGTTGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATTGTTTCAGCTTACAGGCGAACAAACACTCGGGCGATCCTTCTAGATTATGATGGCACGCTAATGCCTCAGGCTTCGATTGATAAGAGCCCGACCAGTAAAACTATTGAATATCTAAGTAGTTTGTGTAAAGACCGTAAAAATTTGGTGTTTCTTGTCAGCGCTAGAAGCCGGAACACACTTGCTGAATGGTTTTCTCCTTGTGACAATCTGGGACTTGCAGCTGAGCATGGTTACTTTCTTAGACTGAAGCGCGACGAGGAATGGGAAACATGTGGGCCTCCAACAGACTGCAGTTGGAAACAGATTGCGGAGCCTGTGATGAAGCTTTACACCGAAACAACCGATGGATCCACCATCGAAGATAGAGAGACTGCACTTGTGTGGTGCTATGAGGATGCAGATCCAGATTTCGGATCGTGCCAAGCCAAGGAGCTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCTGTTACTGTGAAGAGTGGTGAAAATATTGTGGAAGTTAAACCACAGGGTGTGAGCAAGGGGCTTGTGGTGAAACGGCTACTTTCAACCATGCGAGAAAATGAAATAGCGCCTGACTTTGTCTTGTGCATCGGGGATGACCGGTCCGACGAAGACATGTTTGAGGTAATCTCGAGTTCCATGGAAGGTCCTACCATTGCGCCGAGGGCGGAAGTATTTGCATGCACGGTGGGGCGAAAGCCGAGCAAGGCCAAGTACTATCTGGATGACACAGCTGAAATAGAGAGACTGATTCATGGTCTGGCATGTGTTTCAGATCGAACACTTCCAGTATGGTGTGAATGA 2592 0.4699 MVSRSYTNLLDLASGDAPSFGCINRGIPRVMTVPGLISEVDDDPVESVSSDPSSSASAHRDRIIIVANQLPIRLQRRPDCSSSGGNARNWVFSWDENSLLLQLKDGFGDDDIEVIYVGCLKEEIHPNEQDEVSQILLETFKCVPTFLPPDLFSRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCGRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSLTKTEEKVGELIRKFSDRGRTMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGTPGYDPVILIEEPLKFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKVLGLASSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADWEKQLRHEKHYRYVSTHHVGYWARSFLQDLERTCGDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYRRTNTRAILLDYDGTLMPQASIDKSPTSKTIEYLSSLCKDRKNLVFLVSARSRNTLAEWFSPCDNLGLAAEHGYFLRLKRDEEWETCGPPTDCSWKQIAEPVMKLYTETTDGSTIEDRETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGENIVEVKPQGVSKGLVVKRLLSTMRENEIAPDFVLCIGDDRSDEDMFEVISSSMEGPTIAPRAEVFACTVGRKPSKAKYYLDDTAEIERLIHGLACVSDRTLPVWCE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2361 863 CDD HAD_TPP 604 840 - -
Bisa01g2361 863 Pfam Trehalose-phosphatase 606 840 IPR003337 GO:0003824|GO:0005992
Bisa01g2361 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 558 - -
Bisa01g2361 863 NCBIfam HAD-IIB family hydrolase 605 806 IPR006379 -
Bisa01g2361 863 Gene3D Glycogen Phosphorylase B; 54 323 - -
Bisa01g2361 863 Gene3D - 731 858 IPR023214 -
Bisa01g2361 863 Gene3D - 602 730 IPR023214 -
Bisa01g2361 863 NCBIfam trehalose-phosphatase 602 847 IPR003337 GO:0003824|GO:0005992
Bisa01g2361 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 602 719 - -
Bisa01g2361 863 FunFam Alpha,alpha-trehalose-phosphate synthase 324 540 - -
Bisa01g2361 863 FunFam Trehalose-6-phosphate synthase 10 733 860 - -
Bisa01g2361 863 Pfam Glycosyltransferase family 20 62 556 IPR001830 GO:0003824|GO:0005992
Bisa01g2361 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 851 IPR001830 GO:0003824|GO:0005992
Bisa01g2361 863 SUPERFAMILY HAD-like 603 850 IPR036412 -
Bisa01g2361 863 CDD GT20_TPS 62 556 IPR001830 GO:0003824|GO:0005992
Bisa01g2361 863 Gene3D Glycogen Phosphorylase B; 324 540 - -
Bisa01g2361 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 55 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2361 Bisa-ChrBisa01 43746215 43749636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2361 1 860 Trehalose Biosynthesis Gene Families AT1G68020 80.876 0.0 1457