Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2328 ATGAAGTTCAACATTGCCAATCCCACCACTGGGTGCCAGAAGAAGCTTGAAATTGATGATGATGCTAAACTCCGAGCATTTTGGGACAAAAGGATCTCACAAGAAGTTAGCGGAGATGCACTTGGCGAGGAGTTCAAGGGCTATGTTTTCAAAATAACTGGAGGATGTGACAAACAAGGTTTTCCAATGAAGCAGGGAGTGCTGACTCCCGGCCGTGTTCGTCTCTTGCTTCACAGAGGAACTCCTTGCTTCCGCGATTATGGCAGAAGGAATGGAGAGAGGAGGAGGAAGTCTGTTCGAGGTTGCATTGTCAGTCCAGATCTCTCTGTTCTTAACTTAGTCATTGTGAAGAAAGGTGAGAATGATCTTCCAGGATTGACTGACGTTGAGAAGCCAAGAATGAGAGGACCAAAAAGGGCTTCAAAGATCAGGAAGTTGTTTAATCTCTCCAAGGAGGATGATGTACGCAAATATGTCAACACATACCGCAGAACCTTTACAACTAAGTCTGGCAAGAAGGTCAGCAAAGCTCCCAAAATTCAGAGGTTGGTTACTCCCTTGACTTTACAAAGGAAGCGAGCAAGGATTGCAGACAAGAAGAAAAGAATTGCCAAGGCTAAAGCGGAGGCTGCTGAATATCAAAAGCTCCTTGCCAGCCGTTTGAAGGAGCAGCGTGAACGCCGCAGTGAGAGCTTGGCCAAGAGGAGATCTAAGCTTTCTGCTGCATCTAAGCCATCATCAGCTACCGCATAA 753 0.4635 MKFNIANPTTGCQKKLEIDDDAKLRAFWDKRISQEVSGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRDYGRRNGERRRKSVRGCIVSPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRTFTTKSGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKAEAAEYQKLLASRLKEQRERRSESLAKRRSKLSAASKPSSATA 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2328 250 MobiDBLite consensus disorder prediction 219 237 - -
Bisa01g2328 250 PIRSF RPS6e 1 250 IPR014401 GO:0003735|GO:0005840|GO:0006412
Bisa01g2328 250 Coils Coil 189 223 - -
Bisa01g2328 250 MobiDBLite consensus disorder prediction 219 250 - -
Bisa01g2328 250 Gene3D - 133 234 - -
Bisa01g2328 250 PANTHER 40S RIBOSOMAL PROTEIN S6 1 240 IPR001377 GO:0003735|GO:0005840|GO:0006412
Bisa01g2328 250 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Bisa01g2328 250 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Bisa01g2328 250 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2328 Bisa-ChrBisa01 42524949 42526748 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2328 1 248 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 71.084 2.64e-118 334