Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2314 ATGGAGAAACCCCATGTGGGGTTTCGGGTTTCTTTCTTATGCCGTCTCGTTTTCATTTTCCCCCTGGTCTTCTGGGCTCGGGGTCAAGACGCAGATGTCATGCGCATTCTCAAGAACACGATCAACGGCTCTAGCTCCCTCGACTGGTCCGACCCGGATGTCTGCAGATGGAACCACGTTCGCTGCAGTTCGGCGAAACGGGTCACGGCAATCCAGATTGGGAACCTGAACCTCCAAGGGACACTGCCAAAGGAACTCGCAAAACTCTCAGAACTACAGCGTTTCGAGTGCCAATCCAACAGTCTCACCGGGGCATTTCCGTTACTATCCAATACCCTGCAAAACCTCATCATCTTCAACAATGGCTTCACCTCCTTCCCTCCGGATTTCTTCAAGGGCATGACGACGTTACAAGTAGTGAGAATCGACTACAACCCTTTTCCCCAATGGCAAATTCCCGAATCTCTAAAGGACTGTACGGCGTTACAAGCTTTCTCGGCGCAAAATGCCAGTTTAGTCGGAGAAATTCCTGATTTCTTCGGAAAAGACGGTCCATTCCCAGGTTTGACTAATTTGTCCCTCTGTTTCAATCAACTTGTTGGCGGGTTACCTTCAAGCTTGTCTGGTAGTTCAATAGAGTTTCTCTTGGTGAATGGGCAGAAGAGTAATACTAAGCTTAATGGTACACTAGCGGTATTACAGAACATGACGTCTCTGAAACAAATTTGGGCCCATGGAAATGCGTTTACTGGTCCTATCCCTGATTTGTCGAACCTTGATCAATTATTTGATGTGAGTATAAGGGATAACCAGTTATCTGGGGTTGTTCCATCGTCCCTTGTGAATCTTCCTAGTTTACAAGTTGTAAATTTAACGAATAATAATCTTCAAGGACCAATGCCTAAGTTTGAACCAGGAGTGAGGGTGGATATGGAAGGAACGAATCAGTTTTGCACAAACGAGCCTGGTCAGCCATGTAGTTCTTTGGTGAATGTTTTGTTGTCTGTGGCTGAACCTTGGGGTTATCCCTTGAAGTTTGCTTTGAGTTGGAAGGGGAATGATCCTTGTGCTGGTGATTGGATGGGGATTGTTTGCATCAAAGGAAACATTTCGGTTGTCAATTTTCAGAACATGGATCTTTCAGGTACTATTTCTCTGAGTTTTGCAAGCCTCACATCTGTGACAAAATTGCTTCTTTCTAACAATAGTCTCACTGGTACCATACCAAGTGAGCTCACTAGTATGCCTCTTTTGCAAGAGCTGGATGTCTCCAATAATCATTTGTATGGTGCGGTACCGGCTTTTCGGAAAGATGTGAATCTTAAATTAGACGGGAATCCTGATATTGGAAAAGATAGACCTTCTCCTCCACCAGGTGCCCCCGACTCAAATTCTGGAGGTAATGGTAAGAAACATAATTATGCTGTCATTGTTGGGATAGTGGTGGTGGTTATTGTTGTATTGCTCGGTGTAGCAATTTGGGGATTTATTTGGTTTAATAGACAACGTAAGCATTCGGGCAAAGCTCAAGGTCTACATGCAATGGTGATACATCCTCAACATTCTGGAGATGCAAATCCTGTGAAGATCAGTGTTGCAGGTGCTGGTGGAGGAGTAAGTAGTGCACAGAGTAACATAACTAGTAATGCAGTCGGTGATGTTCATGTGGTGGAAGCTGGCAGTCTGGTAATTTCAATTCAAGTTTTAAGAAAAGTTACCAACAATTTTAGTCAAGAAAACATACTGGGGAGGGGTGGTTTTGGAACTGTGTATAAAGGAGAATTGCAAGATGGGACAAAGATTGCAGTGAAAAGAATGGAGTCTGGAACGATGGGCGAGAAGGGGCTGAACGAGTTCAAGGCAGAAATTGCGGTGCTTACTAAGGTTCGACATAAGCATCTTGTTGCACTGCTTGGTTATTGCTTGGATGGAAATGAGAGGCTTCTTGTGTATGAGTACATGCCTCAGGGGACTCTTAGTATGCATTTATTTAACTGGAAAGATGAAGGGCTAAAGCCACTGGAATGGACAAGGAGGCTTATCATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCTCAGCAAATTTTTATTCACAGGGATCTCAAACCGTCAAACATTCTGCTTGGAGATGATATGCGGGCTAAGGTGTCAGACTTTGGATTGGTGCGGCTCGCACCGGAAGGAAAAACCTCATTTGAAACTAGAATTGCTGGAACTTTTGGATATTTAGCACCAGAGTATGCCGCAACCGGACGAGTTACAACAAAGGTTGATGTCTATAGTTTTGGGGTAATTCTCATGGAGATGGTGACTGGGAGGAGAGCGCTTGACGATAGCCAACCCGAAGAGAACTTTCACCTTGTCACATGGTTCCGAAGAATGTTGTTGAACAAGGATAGATTCGAGAAGGCCATAGACCCAACAATTGACCTCAACGAGGAAACCCTCTCCAGTATCAGCACTGTTGCGGAGTTGGCTGGCCACTGCTGTGCAAGGGAGCCCTTTCAACGACCGGACATGAGCCACGTTGTGAATGTGCTAGTGCCTCTTGTGGAGGTGTGGAAGCCTGCAGAAGCAAATTATGATGACCCCAGTGGGATTGACCTTGATATGAACTTACCGCAAGCTCTCAAAAGATGGCAGGCTTTTGAAGGAATGAGCAGCACCATGGGCATGGATTTAACAACCTCATCTTTGCATACCAATTATTCACAGACAAGCATACCTAATAGACCACCTGGGTTTGGAGATTCCTTTACTTCTTCAGATGCAAGATGA 2793 0.4504 MEKPHVGFRVSFLCRLVFIFPLVFWARGQDADVMRILKNTINGSSSLDWSDPDVCRWNHVRCSSAKRVTAIQIGNLNLQGTLPKELAKLSELQRFECQSNSLTGAFPLLSNTLQNLIIFNNGFTSFPPDFFKGMTTLQVVRIDYNPFPQWQIPESLKDCTALQAFSAQNASLVGEIPDFFGKDGPFPGLTNLSLCFNQLVGGLPSSLSGSSIEFLLVNGQKSNTKLNGTLAVLQNMTSLKQIWAHGNAFTGPIPDLSNLDQLFDVSIRDNQLSGVVPSSLVNLPSLQVVNLTNNNLQGPMPKFEPGVRVDMEGTNQFCTNEPGQPCSSLVNVLLSVAEPWGYPLKFALSWKGNDPCAGDWMGIVCIKGNISVVNFQNMDLSGTISLSFASLTSVTKLLLSNNSLTGTIPSELTSMPLLQELDVSNNHLYGAVPAFRKDVNLKLDGNPDIGKDRPSPPPGAPDSNSGGNGKKHNYAVIVGIVVVVIVVLLGVAIWGFIWFNRQRKHSGKAQGLHAMVIHPQHSGDANPVKISVAGAGGGVSSAQSNITSNAVGDVHVVEAGSLVISIQVLRKVTNNFSQENILGRGGFGTVYKGELQDGTKIAVKRMESGTMGEKGLNEFKAEIAVLTKVRHKHLVALLGYCLDGNERLLVYEYMPQGTLSMHLFNWKDEGLKPLEWTRRLIIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKTSFETRIAGTFGYLAPEYAATGRVTTKVDVYSFGVILMEMVTGRRALDDSQPEENFHLVTWFRRMLLNKDRFEKAIDPTIDLNEETLSSISTVAELAGHCCAREPFQRPDMSHVVNVLVPLVEVWKPAEANYDDPSGIDLDMNLPQALKRWQAFEGMSSTMGMDLTTSSLHTNYSQTSIPNRPPGFGDSFTSSDAR 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2314 930 CDD STKc_IRAK 582 855 - -
Bisa01g2314 930 FunFam Receptor-like kinase TMK4 28 323 - -
Bisa01g2314 930 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2314 930 Pfam Protein kinase domain 577 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2314 930 FunFam receptor protein kinase TMK1 538 653 - -
Bisa01g2314 930 SUPERFAMILY L domain-like 44 441 - -
Bisa01g2314 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Bisa01g2314 930 Pfam Leucine rich repeat N-terminal domain 343 365 IPR013210 -
Bisa01g2314 930 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Bisa01g2314 930 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Bisa01g2314 930 Gene3D Ribonuclease Inhibitor 28 324 IPR032675 -
Bisa01g2314 930 FunFam Leucine-rich repeat receptor-like kinase 328 452 - -
Bisa01g2314 930 MobiDBLite consensus disorder prediction 445 468 - -
Bisa01g2314 930 PANTHER OSJNBA0070M12.3 PROTEIN 13 930 - -
Bisa01g2314 930 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g2314 930 Gene3D Ribonuclease Inhibitor 329 453 IPR032675 -
Bisa01g2314 930 Gene3D Phosphorylase Kinase; domain 1 538 653 - -
Bisa01g2314 930 Gene3D Transferase(Phosphotransferase) domain 1 654 867 - -
Bisa01g2314 930 FunFam receptor protein kinase TMK1 654 871 - -
Bisa01g2314 930 MobiDBLite consensus disorder prediction 907 930 - -
Bisa01g2314 930 SUPERFAMILY Protein kinase-like (PK-like) 555 861 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2314 Bisa-ChrBisa01 42321463 42324754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2314 68 852 Receptor kinase-like Gene Family AT5G07280 30.732 4.45e-86 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa01g2314 Pkinase 6.8e-48 CL0016