Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2308 ATGGGGAAGAAGAAGAAGAGGGTATCTTCGAAGGTGTGGTGTTACTATTGCGATCGGGAATTCGATGACGAGAAGATTTTGGTTCAGCATCAGAAGGCTAAGCACTTCAAATGCCATGTCTGCCACAAGAAGCTCTCCACTGCTGGCGGCATGGCCATCCACGTGCTCCAGGTCCACAAAGAAAGCGTCACAAAGGTTCCTAATGCAAAGCCCGGTAGGGAGTCAACAGATATTGAAATATACGGAATGCAAGGGATCCCACCAGATGTCTTGGCTGCTCATTATGGAGAGGATGATGATGAAGTTCCATCAAAGGCAGCCAAAGTGGATATCCCATCAACTCAGCTTGTAGGTGGAGTGGTTCCAGCACCATTAGGCGTGGGATATCCTCCTCAATCAACCTTGGGTGCAATACGACCTATTTATAATCCAGCAGTACCAGTGCCACCAGGAGCTTGGGCAGTTCCACCTCGACCTCAGCCTTGGTATCCCCAACCTCCATCTGTTTCCATCCCTCCTCCTGCTCCTTATGCACAGCAGCCATTATTTCCTGTTCAGAATGTGAGGCCAGCTCTATCAGCAACTGCTTCGCCAGCAGTTTCAACTTCTCAGGTTACTCCTCCTGGGTTGCCAACATCCACACCTGTTGCCGTTTCCCAACCTTTGTTTCCTGTTGTTGGAAATAACCATACTACTATGCAAAGTTCAACATTTTCTGCCCCATCTCTATCTACTGGTGATCCATCAATTACACCTGCCTTGTCTGCAAGTGTCCCTGTCGATGCATATTCAGGAGGGACATCAGGTAACTCGCATTCTTATGCTTCTGGTCCAAATACTGGTGGTCCTTCAATTGGGCCTCCCCCAGTAATATCAAACAAAGCTCCTGCAACTCAACCTGCCACCAATGAGGTCTATTTAGTTTGGGACGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCCTTGCCAAAATACCAGGTGCATGATGAAACTAGCCAGATGAGCTCCATTGATGCAGCTATAGACAAGAGGATACTTGAAAGCAGACTTGCTGGTCGAATGGCATTTTAG 1074 0.4804 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGEDDDEVPSKAAKVDIPSTQLVGGVVPAPLGVGYPPQSTLGAIRPIYNPAVPVPPGAWAVPPRPQPWYPQPPSVSIPPPAPYAQQPLFPVQNVRPALSATASPAVSTSQVTPPGLPTSTPVAVSQPLFPVVGNNHTTMQSSTFSAPSLSTGDPSITPALSASVPVDAYSGGTSGNSHSYASGPNTGGPSIGPPPVISNKAPATQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDETSQMSSIDAAIDKRILESRLAGRMAF 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2308 357 SMART c2h2final6 12 35 IPR013087 -
Bisa01g2308 357 SMART c2h2final6 36 59 IPR013087 -
Bisa01g2308 357 Gene3D Classic Zinc Finger 1 66 - -
Bisa01g2308 357 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Bisa01g2308 357 MobiDBLite consensus disorder prediction 267 298 - -
Bisa01g2308 357 CDD SUF4-like 13 92 - -
Bisa01g2308 357 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Bisa01g2308 357 PANTHER ZINC FINGER PROTEIN 207 1 357 - -
Bisa01g2308 357 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2308 1 357 C2H2 Transcription Factor Family AT1G30970 64.362 8.38e-148 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g2308 None None None