Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2306 ATGATGACACCAAATTTGAACGTGGAACCCGAAAATAATTCAGACGTCAGCAGTCAAGTAGCTTCCAATATAACGTTGCAAGACACGTCCCGTGATCTTACCAAGGAAAGCGCCACAACTTCTTCCTGTCTTACAAATCTGACAAAGCCTGAACCTAATCCAGGGCCTGTTTCTCTTGACTTGTCGCTCAACTTCAGCTCTAGCGATGGTGAGTTGAAGCGCACAAGTGATGCTAGCAGTGAAGTAGGAGCAGAAGCTCAACCTTCAGGAATTCCTAGGGTTTTCTCTTGTAATTACTGTAGGAGGAAGTTCTTCAGCTCCCAGGCGTTGGGTGGCCATCAAAATGCTCATAAAAGGGAGAGGACAATGGCAAAGCGCGCGATGCGAATGGGGATGTTCACCGAGAGGTATACAAGCTTGGCATCTCTGCCTCTACATGGTTCGGCTTTTAGGTCACTTGGTGTAGAGGCTCATGCCGCAATGCACCAAAGACCTATGCCATCACTGAGGGCTCCGGATCTACGAGCCGGGGCAAGATTTGAGAAAGACTATTTCGGATCACCCATGTTCATGGAAGATGATGATGGTATGGGTATTTTTTGGCCCGGGAGCTTCCGGCAGGTAGATGGGGGAGCGGGTGGTAGTTTTGGAGCTCAAAATTCTAGTTTTGTAGCAATTGCACCACCACCACCACCACAACCGCAAACATCCACATCCCCTGATCTCACTCTCAAGCTTTAA 741 0.4858 MMTPNLNVEPENNSDVSSQVASNITLQDTSRDLTKESATTSSCLTNLTKPEPNPGPVSLDLSLNFSSSDGELKRTSDASSEVGAEAQPSGIPRVFSCNYCRRKFFSSQALGGHQNAHKRERTMAKRAMRMGMFTERYTSLASLPLHGSAFRSLGVEAHAAMHQRPMPSLRAPDLRAGARFEKDYFGSPMFMEDDDGMGIFWPGSFRQVDGGAGGSFGAQNSSFVAIAPPPPPQPQTSTSPDLTLKL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2306 246 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 122 IPR013087 -
Bisa01g2306 246 MobiDBLite consensus disorder prediction 25 56 - -
Bisa01g2306 246 FunFam Zinc finger protein 2 72 141 - -
Bisa01g2306 246 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 40 169 IPR044246 GO:0009788
Bisa01g2306 246 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Bisa01g2306 246 MobiDBLite consensus disorder prediction 219 246 - -
Bisa01g2306 246 SUPERFAMILY beta-beta-alpha zinc fingers 93 123 IPR036236 -
Bisa01g2306 246 Gene3D Classic Zinc Finger 83 142 - -
Bisa01g2306 246 MobiDBLite consensus disorder prediction 25 52 - -
Bisa01g2306 246 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2306 Bisa-ChrBisa01 42158171 42158911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2306 88 246 C2H2 Transcription Factor Family AT1G66140 46.032 1.36e-40 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g2306 None None None