Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g2305 ATGATTGGAGGGAAAGATCTCCCTAATGGTCTTGACTCTGACGGGGAGAACTCTCGGAGCAAGCTGACAAAGCCCAATTTTGACCACAGTAAGGAGAATCAAGAAGAGAAAATAGGCAAATATTTTCTTAAAGATTCAGAGGTGGGTGGTGATGGGATTCAATTGAAACCCTCAAAAGTTGGGGCTTCGGGCTTTCAAGAGCTTACTCTCAGCTATCTCTGTGATAAGGAGATTTCTGGTAAAAGCTTACTGAATTCCTTGGAAAAAGTGAGTTGCAAAGGTAAAGAAGTCATCGTTTCAGAGAATTCAAATCCGGATGAAAAATGGGTCGAAAGAGATTTTCTGAATTTGAGTGAAACGAGGGAAAATACTTCAAAGCGATCGGTTGAAGAAGAGATTGATAGGGAAAATAAAGACAAGAAGCCGAAGCTGGAGACGCTTAATCTTTCTCTTGCCCTTCCTGATGTCTCACTTTCTCTCACAGCTTCAAACGCCCTACAAAACGGTGATCAACCGGTGAGGCCAAAGCCTAGCAAGCCGTCAACGACCACATATTCGAATGATTATACAACGGCTTCTCTCTCATACTCGTATTCTCATCCGTTCTCGCACAACCCAAGCTGCTCGCTTACCCGTAATTCTACAGATAATTTTGATTATTCAGTCAGCAAAGACGATCATATTTGGAACTGTGGGGAGGGAACTAATGGGTCAGTTCATAGTCGGTTCAAGCCAATAGGAGATGGGGTTGCCTTGTCAAATCACGGTGGTGGTGGGCTTAATTCGATTGTGCAGGGTAACAATAGTCAGTATAAAACTACAAGTTCAGATAACCATTCTTTTTTCCCGTCAGAGTTGCCCGCCAGGCCTAGATTTGAAGCTCAGTCAGAGTTGCCTCCCAGGCCAAGATTTGAAGCTCAGTCAGGGGATTCAAGAGGAAGGAATTCTGAGAATCTGAGAGGACTGGAAGGTTTAGATAGTGCAAAAATGAGGAAGCTTTCTAGGCCAGAGAAAATTCTCAGAGAGATTGTTTTGGAGTCCATCGCTGCCATGGCTGTGACATTTCAAGAGCTTACTGATGAAGTAATTGCTTCGACTAAGGAATACTTAAAGAATCTCATTGAACTTCCTGAGAAGAAAGACGAATTGGTCAGCCTCCAAAATCGGCTTGAGCGAAGATCTGATCTTACCAAGGAGACTCTTTCGAAGTGCCACAAAGGTCAACTAGAGATTTTAGTTGCTATCAAGATGGGGCTTGGAAGCTTCTTATCTGGCAAAGTTCACTTCTCTGAGATGGTAGAGATTTTCTTGTATATGAGATGTAGAAATGTGAACTGCAAGAGCTTGCTGCCTGTTGATGACTGTGAGTGCAAGATTTGCTCTGGAAATAAGGGATTTTGTGGTTCTTGCATGTGTCCTGTCTGTTTGAACTTTGATTGTGCAAACAACACATGCAGTTGGGTTGGTTGTGATGTTTGTTCTCACTGGTGCCATGCCGCCTGTGGCATTAAGAGGAATCTTATCAAACCTGGGCCTAGCTTAAAAGGACCGTCGGGGACCACCGAGATGCAGTTTCATTGCATTGGTTGTGGACATGCTTCAGAAATGTTTGGGTTTGTTAAAGATGTGTTCATGTGTTGTGCAAAGGATTGGGGTCTAGAAACCCTGGTGAAAGAGCTTGACTGTGTAAGGAGGATTTTCAAAAGAAGTGAAGATCGCAAAGGGAAGGAATTGTATTTTAAAACTGATGATATGCTCTTTAAGCTTCAAACGAAAATGGTATCTCCTTTGGATGCCTGCAATTACATCCTACAATTTTTCAACTATGCAGATAGCGTGTCAGACTTTCCTGGTTCCGGTATATCTTCAAGGGATTTAGCAGCATCTCAAGCTAACCTTAGGAAGGAAGCAACATCTATTTCACAATCTAATTGTCTTATGTCAAAATATACTTATAACACCAGCTATTCTAGGTCACAATGTGATGTTCTGTCAAATGATCTTAATCAGAAAGATTTCAAAGCCTCCCTCTTGAGTGAACTGAAAAATGAGAGTGATTTCCAGTTAGGGGCTTTGTTAAGGAAAGGTGGGATTGATAGCTTGGAGAGCATTGTAAGGATAAAGGAAGCAGAAGCCAGAATGTTCCAAAACAAGGCGGACGAAGCACGGAGAGAAGCTGAAGGGTTCCAGAGGATGATAAGGACGAAGACTGGGCAGATGGAAGAAGAATATGCCGAAAGGCTCGCCAAGCTCTCTCTGCAAGAGACCGAGGAAACTCGGAAGAAGAAATTGGAGGAACTGAAAGTCTTGGAAAATTCCCATTTTGACTACCATAAAATGAAAATGAGAATGCAGGCTGAGATTGCTGGTTTGTTGGAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTGA 2412 0.4274 MIGGKDLPNGLDSDGENSRSKLTKPNFDHSKENQEEKIGKYFLKDSEVGGDGIQLKPSKVGASGFQELTLSYLCDKEISGKSLLNSLEKVSCKGKEVIVSENSNPDEKWVERDFLNLSETRENTSKRSVEEEIDRENKDKKPKLETLNLSLALPDVSLSLTASNALQNGDQPVRPKPSKPSTTTYSNDYTTASLSYSYSHPFSHNPSCSLTRNSTDNFDYSVSKDDHIWNCGEGTNGSVHSRFKPIGDGVALSNHGGGGLNSIVQGNNSQYKTTSSDNHSFFPSELPARPRFEAQSELPPRPRFEAQSGDSRGRNSENLRGLEGLDSAKMRKLSRPEKILREIVLESIAAMAVTFQELTDEVIASTKEYLKNLIELPEKKDELVSLQNRLERRSDLTKETLSKCHKGQLEILVAIKMGLGSFLSGKVHFSEMVEIFLYMRCRNVNCKSLLPVDDCECKICSGNKGFCGSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIKRNLIKPGPSLKGPSGTTEMQFHCIGCGHASEMFGFVKDVFMCCAKDWGLETLVKELDCVRRIFKRSEDRKGKELYFKTDDMLFKLQTKMVSPLDACNYILQFFNYADSVSDFPGSGISSRDLAASQANLRKEATSISQSNCLMSKYTYNTSYSRSQCDVLSNDLNQKDFKASLLSELKNESDFQLGALLRKGGIDSLESIVRIKEAEARMFQNKADEARREAEGFQRMIRTKTGQMEEEYAERLAKLSLQETEETRKKKLEELKVLENSHFDYHKMKMRMQAEIAGLLERMEATKQQWV 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g2305 803 MobiDBLite consensus disorder prediction 266 282 - -
Bisa01g2305 803 Pfam PHD - plant homeodomain finger protein 441 565 IPR032881 -
Bisa01g2305 803 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 93 802 IPR004082 -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 17 36 - -
Bisa01g2305 803 CDD PHD_OBE1_like 471 530 IPR047578 -
Bisa01g2305 803 Coils Coil 753 773 - -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 266 285 - -
Bisa01g2305 803 Coils Coil 781 801 - -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 121 140 - -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 1 36 - -
Bisa01g2305 803 Pfam Coiled-coil region of Oberon 670 792 IPR032535 -
Bisa01g2305 803 Coils Coil 705 732 - -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 393 408 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 699 719 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 551 570 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 354 376 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 478 498 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 738 760 IPR004082 -
Bisa01g2305 803 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 432 453 IPR004082 -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 164 186 - -
Bisa01g2305 803 MobiDBLite consensus disorder prediction 293 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g2305 Bisa-ChrBisa01 42148686 42153204 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g2305 435 538 PHD Gene Family AT5G57380 28.846 3.59e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g2305 01 42148686 42153204 Bisa01g2305 01 42148686 42153204 ECH